Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1341 ATGATTTCGGATCCGAAATTAGTCTTCTACGCCTGCATTTCCAAGGGGACTACGATTCTGGCGGAGTTTAATTCAGTGGATCCGGATCTGCAAACCCTAGCTCTCAAATGCCTGGAGAAAGCTCCTGCGTTGCACTCCATGTTCTCCCATACAGTTCGACAACGGACGTACACGTTCTTGCTAGACGAGCCCGATCCGTATGTTTATTTTGGCATTTTCGATGAAAAGATGGAGAGATATGAGACGCTATGGTTCCTCAATCGGGTAAAAGAGGCGTTCAAGGGCATGATTCGGAATGATCCGATAAAGAATTTCGATGATCTTAGCTCTCATTGCTTTCAAGGAGAATTCAATCCCGTTTTTCGGCAATTATTGTCTCATCCGGTGGAGCCAGAGCAATTGAATTTGGATTTGAATTCGAGTTTGCCTCAAAATGTCTTGAAAGATAAACGAAATTTGAGTCTGGATTGTTCTACCAGAGGGAAGAGGATTGTATCCTTGCCATTGCTTGGGAAGCCAGGTAAGGGGCTGAAGAAGAAGAAGAGATTATCGGGTGAAGTCAATGGCGATACCCGAGATCATCTAATGGAGAATAAGGTGGTTGATGTATCAGATGATGGCGGTAGCCAAACAAGGGATTTTCCGGCTTCTATGCAAAAGAATGGTGGATATTTGGGCGACATGGCTGCAGGAAGACAGAAGGCGAAGCAAGTCTGGAAGCAACAAGTTTGGATGGTGTTGATACTGGACTTGTGTGTGTGTTCGGTATTGTTCGGAGTTTGGTTGTGGATTTGCAGGGGCTTCAGGTGCGTTGATGGTTGA 822 0.4538 MISDPKLVFYACISKGTTILAEFNSVDPDLQTLALKCLEKAPALHSMFSHTVRQRTYTFLLDEPDPYVYFGIFDEKMERYETLWFLNRVKEAFKGMIRNDPIKNFDDLSSHCFQGEFNPVFRQLLSHPVEPEQLNLDLNSSLPQNVLKDKRNLSLDCSTRGKRIVSLPLLGKPGKGLKKKKRLSGEVNGDTRDHLMENKVVDVSDDGGSQTRDFPASMQKNGGYLGDMAAGRQKAKQVWKQQVWMVLILDLCVCSVLFGVWLWICRGFRCVDG* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1341 273 Gene3D Longin domain 2 132 - -
Vvi16g1341 273 SUPERFAMILY SNARE-like 8 121 IPR011012 -
Vvi16g1341 273 ProSiteProfiles Longin domain profile. 7 121 IPR010908 -
Vvi16g1341 273 PANTHER PHYTOLONGIN PHYL1.2 1 271 IPR044783 GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1341 6 270 Miscellaneous Gene Families AT3G54300 25.524 5.29e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1341 - - vvi:100262242 536.954