Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1340 ATGGGTGAATACAAAATGGAGGAGATGTCACTCCTAGCCCTATTCGAACAAGCTCGGAAGATTCATCTAGCGGCATCTGAATCAGGCGCCGATCAGGACGCTGTGAGGAAGGGCTGTGAGGCGCTGGAGAAGTGCGAGGAGATGGTAAGCAAGCTGGGGTTGTTCTCCTCGAACGAGACTAAGGATGATATCAGCACAAGTAATCTCAAATATCTTCTGGTACCTTTTTATCTTGCCGAGTTGACTGAGAAAATTGCACAGGATGATAGGATACAGATTCTTAAGGTTTCCCAAGCAAAATTAAAGGAATTCATTTCATTTTGTGAGGCAATGGAGCTTGTACCAGAAGAGGAGTTAGAAACATCCACGCAGGGGGGTCCAAATTCTTTCGCAGATCGAAGGGCAAAAAAGATTGCTCGGTTCAAACGTCAAAGAGCTGCAGAGTCAAAACTATTGGAAATAAAGGAGCGGAAGGAGCGGCGTGGGCGTTCAACTAAAGCATCTGCGTTATCTACTCCTGTTGATACTGGAGATGAAGATGTGCTGGATGATGATGGCGAGGAAGAACGGGAGGCTTGGCTTACAACCATCTCTTTGGCACTCTGTAAGGCTTTTGATCTACTGGAAATGCTCAAGAAAGAGGAAGAAATGCTTTCTGCTATCAAGGAAAAACAATTACAGGAAGGTGATAAGGAAGTTTCTCGGGCTATTCTTGATGAACGTGCCAAGAGAACAGAAGATTGGCATCGTGATGCTGCAGCTCGGGCACAATATACAAAGCCTGCACCGCCCATTACATGTGCCACATTCGCTCAAGATGTTTTAGAAGGGAGAGCTACAGTTTCTCAGGTACATGAGCACAAACACCAGCCAATGATATTTGGACCAGCAAGTCTCGTGGGTGGAAGGCTAACAAATGAAAGGGAAATAATGGCAGCACAGGTTTTCCAGCCTAGTCACAGACTGCCAACTATGAGCATAGAGGAAGCTGGATTAAGGGAGATGGAAATGATGAACAAATGGCAAGAGAGGAACGCAAAGCTCATTGAAGAAGCCAATTCCTCATGGCACAAGGAGAGTCGGAAACCAGGGCCAAGTGAAGAGGATGATGAAGATGATGATGCTGCCCAAGAGAAGGCAAGGGCATGGGATGACTGGAAAGATGATAATCCTCGTGGTGCAGGCAATAAGAAGCTCACTCCTTGTGGGTAA 1212 0.4629 MGEYKMEEMSLLALFEQARKIHLAASESGADQDAVRKGCEALEKCEEMVSKLGLFSSNETKDDISTSNLKYLLVPFYLAELTEKIAQDDRIQILKVSQAKLKEFISFCEAMELVPEEELETSTQGGPNSFADRRAKKIARFKRQRAAESKLLEIKERKERRGRSTKASALSTPVDTGDEDVLDDDGEEEREAWLTTISLALCKAFDLLEMLKKEEEMLSAIKEKQLQEGDKEVSRAILDERAKRTEDWHRDAAARAQYTKPAPPITCATFAQDVLEGRATVSQVHEHKHQPMIFGPASLVGGRLTNEREIMAAQVFQPSHRLPTMSIEEAGLREMEMMNKWQERNAKLIEEANSSWHKESRKPGPSEEDDEDDDAAQEKARAWDDWKDDNPRGAGNKKLTPCG* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1340 403 MobiDBLite consensus disorder prediction 348 365 - -
Vvi16g1340 403 PANTHER IMMUNOGLOBULIN-BINDING PROTEIN 1 7 400 IPR007304 GO:0009966
Vvi16g1340 403 MobiDBLite consensus disorder prediction 376 394 - -
Vvi16g1340 403 MobiDBLite consensus disorder prediction 348 403 - -
Vvi16g1340 403 FunFam PP2A regulatory subunit TAP46 10 232 - -
Vvi16g1340 403 MobiDBLite consensus disorder prediction 157 187 - -
Vvi16g1340 403 Gene3D - 9 221 IPR038511 -
Vvi16g1340 403 Pfam TAP42-like family 13 391 IPR007304 GO:0009966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1340 K17606 - vvi:100267623 760.755