Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1336 ATGGAGACCATGACTTCATCTTCACTCCCCCTCCCTCGAGAAGCATCAACTTATGATGAGGTTTCTATGGAGCAGAGCCTCCTGTTCTCAGATAGTCTCAAGGATTTGAAGAATCTGAGATCACAGTTGTACTCAGCAGCTGAGTATTTTGAGCTATCCTACACCAATGATGACCAAAAACAGATAGTGATGGAGACATTGAAAGAGTACGCCATTAAAGCTCTTGTGAATACTGTGGACCATCTGGGTTCTGTGACATACAAGGTGAACGATCTCTTAGATGAAAAGGTTGATGAAGTTTCCGGTACAGAGCTTCGAGTATCTTGCATTGAACAGAGACTGCGGACGTGCCATGAATATATGGATCATGAGGGCGTCTCCCAACAGTCACTGGTGATTGATACACCCAAGTACCACAAACGATACATCTTGCCAGTTGGGGAAACCATGAATGGTGGCAGAACTAAATCGAAGTACCAGGGACGCAGCCTGGATGATGAAGATGACTGGCATCAATTTAGGAATGCTGTTCGTGCCACAATTATAGACACCCCATCATCTTCATTCAGAAAAGGGAATTCACCATCACCTTCTCCACGGCTTTCTCGGCCAGCAACCTTTTCCTTCACTGGCACCATGCCCAGAAAAGATCTAGAGAAGCGGGCAGTTTCACCTCATCGGTTTCCTCTTTTACGATCTGGGTCTGTCTCTAGTAGGCCAACCACTCCAAACTCGAGCAGACCGACTACTCCCAACACTGCTGCTGCAAGACGGTACCCTTCTGAACCAAGAAAGTCAGCTTCAATGCGGCTCCATCCTGAAAGGGAGAACCCCAAAGATATGGAGCAATACCCCAGCAAGAGTAAACGGCTCCTCAAGGCATTGCTCAGCCGACGCAAGTCGAAGAAAGATGAGATGCTATATACTTACTTGGATGAATACTGA 945 0.4677 METMTSSSLPLPREASTYDEVSMEQSLLFSDSLKDLKNLRSQLYSAAEYFELSYTNDDQKQIVMETLKEYAIKALVNTVDHLGSVTYKVNDLLDEKVDEVSGTELRVSCIEQRLRTCHEYMDHEGVSQQSLVIDTPKYHKRYILPVGETMNGGRTKSKYQGRSLDDEDDWHQFRNAVRATIIDTPSSSFRKGNSPSPSPRLSRPATFSFTGTMPRKDLEKRAVSPHRFPLLRSGSVSSRPTTPNSSRPTTPNTAAARRYPSEPRKSASMRLHPERENPKDMEQYPSKSKRLLKALLSRRKSKKDEMLYTYLDEY* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1336 314 MobiDBLite consensus disorder prediction 181 209 - -
Vvi16g1336 314 MobiDBLite consensus disorder prediction 263 287 - -
Vvi16g1336 314 MobiDBLite consensus disorder prediction 181 288 - -
Vvi16g1336 314 PANTHER ABL INTERACTOR FAMILY MEMBER 15 314 IPR028457 -
Vvi16g1336 314 MobiDBLite consensus disorder prediction 234 256 - -
Vvi16g1336 314 Gene3D - 19 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1336 Vvi-Chr16 21814649 21817185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1336 - - vvi:100245321 586.645