Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi16g1335 | ATGGAGGCTGTTGCTTCTCGCACCCCAGATGCTCAAACCCTTCCCTCTGAATGGGGGTTCAGCTGTGATTTGGAAGTAGATTATGAGTCTCAGGAGATTGCTTCCATTGTTTACTCAGCATTAGATGTTGATAAGGAGTTGCATCCAGACAAAGTAAAGAGGCAAATGTCAGTCTCTGATGGGAAACTTTCAGTGCATTTTGAGGGGGTGGAGGCAAGATTTCTTCGTGCATCATTTAGTGCCTTTGTTGACGTTCTAACCCTCGCTACAAAAACAGCCGAGGAATTTGGGAAAGGAATGGAATCGTGGCACCATTCACCAGTACCCAATTAG | 333 | 0.4565 | MEAVASRTPDAQTLPSEWGFSCDLEVDYESQEIASIVYSALDVDKELHPDKVKRQMSVSDGKLSVHFEGVEARFLRASFSAFVDVLTLATKTAEEFGKGMESWHHSPVPN* | 111 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi16g1335 | 110 | Gene3D | - | 12 | 102 | - | - | |
| Vvi16g1335 | 110 | PANTHER | EKC/KEOPS COMPLEX SUBUNIT PCC1 FAMILY MEMBER | 15 | 98 | IPR015419 | - | |
| Vvi16g1335 | 110 | FunFam | L antigen family member 3 | 14 | 98 | - | - | |
| Vvi16g1335 | 110 | Pfam | Transcription factor Pcc1 | 21 | 94 | IPR015419 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi16g1335 | K15902 | - | vvi:100250448 | 223.402 |