Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1334 ATGCCTTTTTGCCGCGTCGGGCACTACCAGAACGCCGGCGATACCGGAGGTAACAATGGAATCGGGATTTACTATAGAACCTATGGCCACGGACCCATAAAGGTTCTTCTCATCATAGGATTGGCGGGGACCCATGACTCTTGGGGCCCACAAATCAGGGGGCTGACCGGAACGGAAACGCCAAATGATGATGATGATTCTGGCGCCGATGGGAGGGGTCCCGGTGAGGATGGAGATGGTGGATGCAATGGAGGTATTGAAGTCTGTGCATTTGATAATCGTGGAATGGGTCAGAGCTTTGTGCCCACCAAAAAATCAGAATATACAACAAAAATTATGGCAAAAGATGCAATAGCTTTAATGGATCATTTGGGTTGGAGGAAAGCTCACATTTTTGGGCATTCAATGGGAGCTATGATAGCTTGCAAATTGGCAGCAACCGTGCCTGATAGAGTTCTGTCTTTGGCTTTACTGAATGTAACAGGTGGTGGTTTTGAATGTTTTCCAAAGCTTGACCGAAAGACTCTATCGATCGCAATCCGTTTCTTGAAGGCAAAAACTCCTGAGCAAAGGGCAGCTGTTGACTTAGATACTCATTACACAGAGGAATATCTTGAGGAATTCATTGGACCTAACACGAGAAGAGATATTTTGTATCAAGAATATGTGAAAGGTATATCATCGACTGGGATGCAATCCAATCATGGTTTTGAAGGTCAAATTAATGCATGCTGGACACATAAAATGACAAAAGCAGAACTTGAATTGATCCGCACGGCTGGGTTTCTTATATCAGTTATTCATGGCAGATATGACATCATTGCTCAAATATGTCACGCAAGGCGACTTGCAGAGAAGCTTCAGCCTTGTGCTAAAATGATTGAGCTTCATGGGGGACATCTAGTGAGCCATGAGAGGACTGAAGAGGTCAATCAAGCTCTTCTTGAGTTGATTAATGCATCAGAAACAAAGATTAGCCCGCATGATTGGACAAATTTGACCAAGGAAACCTCTGGGTGCCTAGTCACATGGATGTCACGTAGAAGAACCGATGCCGATGGAGGAAGCAGTCCATGTTTCTTGTTTTCAATTCTAGAAAAGCTTCATCTTTGCATATTGTACCTGTTTGGTCTCTTCATGTTGGCACAGGAATATGGAAGAAGAGCTTTGAGACGTATAAAACCAGTTGGAGTTGGAGCTTCCGTCAAATAA 1212 0.4406 MPFCRVGHYQNAGDTGGNNGIGIYYRTYGHGPIKVLLIIGLAGTHDSWGPQIRGLTGTETPNDDDDSGADGRGPGEDGDGGCNGGIEVCAFDNRGMGQSFVPTKKSEYTTKIMAKDAIALMDHLGWRKAHIFGHSMGAMIACKLAATVPDRVLSLALLNVTGGGFECFPKLDRKTLSIAIRFLKAKTPEQRAAVDLDTHYTEEYLEEFIGPNTRRDILYQEYVKGISSTGMQSNHGFEGQINACWTHKMTKAELELIRTAGFLISVIHGRYDIIAQICHARRLAEKLQPCAKMIELHGGHLVSHERTEEVNQALLELINASETKISPHDWTNLTKETSGCLVTWMSRRRTDADGGSSPCFLFSILEKLHLCILYLFGLFMLAQEYGRRALRRIKPVGVGASVK* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1334 403 PRINTS Epoxide hydrolase signature 145 158 IPR000639 GO:0003824
Vvi16g1334 403 PRINTS Epoxide hydrolase signature 85 100 IPR000639 GO:0003824
Vvi16g1334 403 PRINTS Epoxide hydrolase signature 131 144 IPR000639 GO:0003824
Vvi16g1334 403 PRINTS Epoxide hydrolase signature 295 317 IPR000639 GO:0003824
Vvi16g1334 403 SUPERFAMILY alpha/beta-Hydrolases 19 316 IPR029058 -
Vvi16g1334 403 MobiDBLite consensus disorder prediction 52 81 - -
Vvi16g1334 403 Gene3D alpha/beta hydrolase 17 320 IPR029058 -
Vvi16g1334 403 Pfam alpha/beta hydrolase fold 85 160 IPR000073 -
Vvi16g1334 403 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN 9 324 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1334 15 324 Acyl Lipid Metabolism Gene Families AT4G02340 20.231 4.35e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1334 - - vvi:100255632 804.283