Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1333 ATGGCAGCAGCAGAATCAAGGGCTGGCTGGAAGCGAAATACTAACCGTTGCTTCATCCATGAAAATGCCTCAAGAGCTCCAAACTCATCTTCCTTCCCATCATCATCTTCTTCATCCAAACGTCAGTCTGATGGTAGACCTGGTGATGCAGCACATCGGTCAGATCATCCCTCGCCAGATTGCATGCACCAGAATTGTAATCCCTTAGAGGATCCAGCACCTGACTCAAAGTGGTGGTTATACCCGCAACCCAATTTCGGGCATCAGAAGGGTTTTGAACATGAACAGTTAAATACTTTGGAGAATGAGTTTGACATCCTGAGTTACGAGTTCATTAACCAAACTGCCATTGAAGGACTTGGTGCCCAAACTGAAACAAAGAAGAATGCTGATTTTTTCCTGGACAGGTCCAGGAAGGCCTCTGCCGCAAGTATGAAAGAGGACCAATTTGCCAGAATGTCCAAACCCAAGATTGGACTGCATAGTAATCCACAAGATATAGGTAAGGATAAGGACATTGAGGAGTTATGGTACACAGATGAGGACTTGGACCCTGTTAACAGCTTAGTCTCTGAACAATCCAAGAAGCTTTCATCTGATTTGGAATCCCATTGGATGGGAGCCGAGAAGACTGAACCATGGTGGCGTAAAGCTGACAAAGATACGCTTGCTTCCATGGTTGCTCAGAAGTCAGTTGAGCACATTGAGAACTGTGATCTTCCAAAACCCCAGATTAAGCATTTCAGGAGGGGCCTATCTGCTTCTCTAGAGTGGTCTGATCAGGATTGGATGGTCGCTCCATCCTTAGATCAGATGGCAGAGCTGGGGTTTTCGAATCTCACTGACTGCACATGGAAAAGTCATACTTCAGCAAGTATAGATGAGAAACAGTCCAGTTTGGGTGCTATAGAGTACTCGCCAAATCGTTCAGACACATTGTTCAGAAACAATAGTCACAGTATAACTGGCACGGATCAGGAAGAAACATGCCATATTCCTGAAGATGCTAGCAAAGCCCAGCTGGTGGAAGCGCTCTGCCATTCTCAAACACGAGCAAGGGAAGCTGAGAAGGCAGCTCAGCAGGCCTACGAAGAGAAGGAGCACATCATCAAGCTCTTCTTCAAACAGGCCTCCCAACTCTTTGCTTACAAGCAGTGGCTCCAGCTGCTGCAGCTTGAGACCCTTTGTCTTGAACCTAAGAACAAGGACCAACCGATCTCCAGCCACGCTCCAACTGTCTTGCCTTGGATCCCATACATAGCCCAGAAACCCAGAAAGGGTCAGCACAATGGTTCGAAGAAGGGCTCAACAACAAATGGAAATGGGAGAAGCAGGTATACCACCGTTGCCTTTGCTCTGGGGTTGGGTCTTGCTGGTGCTGGCCTACTCCTTGGTTGGACCCTGGGCTGGTTGTTCCCTGCACTCCAAACTGCTTCTAGTTCCAGATCCGCATCATCTTCATTGCAGAACTCAGATTCTGGTTAG 1485 0.4761 MAAAESRAGWKRNTNRCFIHENASRAPNSSSFPSSSSSSKRQSDGRPGDAAHRSDHPSPDCMHQNCNPLEDPAPDSKWWLYPQPNFGHQKGFEHEQLNTLENEFDILSYEFINQTAIEGLGAQTETKKNADFFLDRSRKASAASMKEDQFARMSKPKIGLHSNPQDIGKDKDIEELWYTDEDLDPVNSLVSEQSKKLSSDLESHWMGAEKTEPWWRKADKDTLASMVAQKSVEHIENCDLPKPQIKHFRRGLSASLEWSDQDWMVAPSLDQMAELGFSNLTDCTWKSHTSASIDEKQSSLGAIEYSPNRSDTLFRNNSHSITGTDQEETCHIPEDASKAQLVEALCHSQTRAREAEKAAQQAYEEKEHIIKLFFKQASQLFAYKQWLQLLQLETLCLEPKNKDQPISSHAPTVLPWIPYIAQKPRKGQHNGSKKGSTTNGNGRSRYTTVAFALGLGLAGAGLLLGWTLGWLFPALQTASSSRSASSSLQNSDSG* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1333 494 MobiDBLite consensus disorder prediction 1 69 - -
Vvi16g1333 494 MobiDBLite consensus disorder prediction 17 44 - -
Vvi16g1333 494 MobiDBLite consensus disorder prediction 45 59 - -
Vvi16g1333 494 PANTHER EXPRESSED PROTEIN 1 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1333 Vvi-Chr16 21800181 21802461 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1333 - - vvi:100243561 905.205