Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1331 ATGGCTTATATGCAATATGGAAGAAATATCCTCCGCCACATTGTTAAAGATGTGGGTTCTCAATGCTCAGATCGGGTAGTGAATCCGCTCCTATATGTTTGTCAAGGAGTTCGATACAGGAAGTTGGAGGTTATTCTTACAACGAACATAGATAAGCTGGGCAAAGCAGGTGAGACAGTGAAGGTTGCTCCTGGGTATTTTCGCAACCATTTGATGCCCAAGTTGCTTGCAGTCCCAAATATTGAGAAGTTTGCTTATCTCATCAGCGAGCAGCGCAAGCTTTACCAACCTGAGGAAGTGGAAGAGGTTAAAGAAGTTGTAGAGACTGAGGAAGACAAGATGAAAGAATATCATACTGCAGCTAAACGTCTAGAAACTACTAGAGTGGCTTTCAGGAGGTTCATTAAGTTTGAAAAGGGCCAGCCTGTGAGGAAGGGTGAACCCTTAGAGTTGCGTTCACCCATCACAAAGGATGATCTTGTGGCAGAGGTGGCAAGGCAGCTTTCCGTGCAGGTAGAACCCGAAAGCCTGCATCTACCTTCTCCTTTGACGCATGTGGGAGAGTTTGAGGTGCCGCTCCGACTACCAAAGTCCATCCCTTTGCCGGAGGGAAAGGTCCGCTGGACTCTCAAAGTTAAAATCCGCTGCAAATGA 654 0.4664 MAYMQYGRNILRHIVKDVGSQCSDRVVNPLLYVCQGVRYRKLEVILTTNIDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAYLISEQRKLYQPEEVEEVKEVVETEEDKMKEYHTAAKRLETTRVAFRRFIKFEKGQPVRKGEPLELRSPITKDDLVAEVARQLSVQVEPESLHLPSPLTHVGEFEVPLRLPKSIPLPEGKVRWTLKVKIRCK* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1331 217 PANTHER 50S RIBOSOMAL PROTEIN L9 12 213 IPR000244 GO:0003735|GO:0005840|GO:0006412
Vvi16g1331 217 Coils Coil 100 127 - -
Vvi16g1331 217 Gene3D - 112 215 IPR036791 -
Vvi16g1331 217 Pfam Ribosomal protein L9, N-terminal domain 43 79 IPR020070 -
Vvi16g1331 217 FunFam 50S ribosomal protein L9 112 215 - -
Vvi16g1331 217 Gene3D - 42 85 IPR036935 -
Vvi16g1331 217 SUPERFAMILY L9 N-domain-like 42 96 IPR009027 -
Vvi16g1331 217 FunFam 50S ribosomal protein L9 42 104 - -
Vvi16g1331 217 SUPERFAMILY Ribosomal protein L9 C-domain 111 199 IPR036791 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1331 K02939 - vvi:100260703 416.772