Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1325 ATGAAAGGAGGAAGGAAGAATCTGAAAAGGGCAGCTGAGGAACAGACCTTGACTCTTCAAGAAGGTCAAAGCATTATGCAAGTTGTGTCCCTTCGAGGCACCAATCTCATTGAGGTAATGGATGCTCGGGGCGAGAATTCACTGGCGTTGTTTCCAGCCAAATTTCAAAAGAGCATGTGGATAAAAAAAGGGAGTTTTGTTGTGGTTGATGAAAGCGGAAGGGAGAAAGCTATGGAGTCGGGTAGCAAGGTGGCATGCCCGAAATCTTTAAATCAACACTCCTGCATGATTCTAATGGAACCTCCTTGCATAGTAACACCTCCCAACAAGAAGAGTTTAAATCAACAGCCCGGCATGATTCTAATGGAAACTTGCATTGTAGCACCTCCCAACAAGAAGAGGATGAATCCAGCTCCAGTGATGATGATGGTCTACCCCCATTAG 444 0.4527 MKGGRKNLKRAAEEQTLTLQEGQSIMQVVSLRGTNLIEVMDARGENSLALFPAKFQKSMWIKKGSFVVVDESGREKAMESGSKVACPKSLNQHSCMILMEPPCIVTPPNKKSLNQQPGMILMETCIVAPPNKKRMNPAPVMMMVYPH* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1325 147 ProSiteProfiles S1 domain IF1 type profile. 13 89 IPR006196 GO:0003723|GO:0003743|GO:0006413
Vvi16g1325 147 Pfam Translation initiation factor 1A / IF-1 22 74 IPR006196 GO:0003723|GO:0003743|GO:0006413
Vvi16g1325 147 SUPERFAMILY Nucleic acid-binding proteins 4 75 IPR012340 -
Vvi16g1325 147 PANTHER TRANSLATION INITIATION FACTOR-RELATED 1 86 IPR039294 -
Vvi16g1325 147 SMART eIF1neu4 18 120 IPR001253 GO:0003743|GO:0006413
Vvi16g1325 147 Gene3D - 9 87 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1325 K15025 - vvi:100248727 168.703