Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1318 ATGGCGACCCTCTCGATTCCGCTGTCTCTTCAACACTCCTCTCCAAAACGGCACCGTTTTTCTGTTCCAGAACTGCACTCACCATTCCGAATCAGCTGCTCTGCTAGCTGGGATAGTCCCGAACTAAAGGCAAGCTCATCACAGTTTAAGGAACTTAAAAATGTAGCTTTTGGGATTCTTGCTGTTTGTGCCGTGACTGCTGCCTCGCCTGTCATTGCTGCCAGTCAGAGGCTGCCTCCATTGTCCACAGAACCCAACCGCTGTGAGCGGGCATTTGTTGGAAACACGATCGGTCAAGCAAATGGCGTTTATGACAAGCCAATCGACCTTCGCTTCTGTGACTACACAAACGAGAAATCCAACCTCAAGGGGAAGTCTCTTGCAGCAGCACTCATGTCAGAAGCTAAGTTTGATGGTGCAGACATGTCCGAGGTAGTGATGTCAAAGGCTTATGCCGTTGGAGCCAGCTTCAAAGGCGTAGACTTCACGAATGCGGTTCTGGACCGGGTGAATTTTGGGAAGGCCAATCTCCAAGGAGCTGTGTTCAAGAACACTGTATTATCAGGCTCCACCTTCGACCAAGCTCAGCTGGAAGATGCAGTGTTTGAGGACACCATTATCGGCTACATCGATCTTCAGAAGATTTGTACAAACACCAGCATCAATGCAGACGGAAGAGCTGAGCTCGGATGCCGGTAA 699 0.4993 MATLSIPLSLQHSSPKRHRFSVPELHSPFRISCSASWDSPELKASSSQFKELKNVAFGILAVCAVTAASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSLAAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTNAVLDRVNFGKANLQGAVFKNTVLSGSTFDQAQLEDAVFEDTIIGYIDLQKICTNTSINADGRAELGCR* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1318 232 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 8 232 IPR044195 -
Vvi16g1318 232 Gene3D - 108 232 - -
Vvi16g1318 232 Pfam Pentapeptide repeats (8 copies) 167 204 IPR001646 -
Vvi16g1318 232 Pfam Pentapeptide repeats (8 copies) 127 164 IPR001646 -
Vvi16g1318 232 SUPERFAMILY Pentapeptide repeat-like 109 214 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1318 - - vvi:100267488 459.529