Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1308 ATGGCTGAATTGACCGGCCCTCGATTGTATAGCTGTTGCAATTGTCGGAATCATGTGTCCCTTCATGATGATATAGTCTCTAAAGCTTTTCAGGGAAGACATGGCCGAGCATTTCTGTTCTCCCATGCTATGAACATTGGTGTGGGGCCTAAGGAAGACAGGCAACTCACAACCGGTCTCCACACCGTTGCTGATATCCATTGTGCAGATTGCCGCCAGGTGTTGGGATGGAAGTATGAACGAGCCTACGAGGCATCACAGAAGTACAAGGAAGGAAAGTTCATACTCGAGAAATCAAAGATTGTCAAGGAAAACTGGTAA 321 0.4673 MAELTGPRLYSCCNCRNHVSLHDDIVSKAFQGRHGRAFLFSHAMNIGVGPKEDRQLTTGLHTVADIHCADCRQVLGWKYERAYEASQKYKEGKFILEKSKIVKENW* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1308 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 102 IPR004910 -
Vvi16g1308 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
Vvi16g1308 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 7 103 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1308 Vvi-Chr16 21621859 21623043 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1308 - - vvi:100246985 228.024