Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1307 ATGGGGGAATTTCCTGGTCATCGTCCTACCTTCAGCTGCAGGAATTGCAGAAACCCCGTTGCTTTCTGGCAAGACCTCATTTCTAAAGATTTTTGGGGAAAATCTGGGCGAGCATTCTTGTTCCACCATGCAATGAACATAGTTGTGGGGGAAAAGGAGGAGAAGCAGCTCATCACTGGACTTTTCACCATAGCCAACATCTCTTGCAGCAACTGTGGGGAGGTGATGGGTTGGAAGTATGTGCAGGCTTATGAGCCAAGGGAGAGGTACAAGGAGGGGAAGTTCATAATTGAAAGAGCCAAGATTGTTAAGGAATACTAG 321 0.4704 MGEFPGHRPTFSCRNCRNPVAFWQDLISKDFWGKSGRAFLFHHAMNIVVGEKEEKQLITGLFTIANISCSNCGEVMGWKYVQAYEPRERYKEGKFIIERAKIVKEY* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1307 106 ProSiteProfiles Yippee domain profile. 9 106 IPR034751 -
Vvi16g1307 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 9 104 IPR039058 -
Vvi16g1307 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 103 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1307 Vvi-Chr16 21618155 21619392 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1307 - - vvi:100252122 229.565