Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi16g1300 | ATGGAGAGATTGCCAGGAGATCTCTGTCTCAAGATTTTCTACTTGTTGGATCACCAGAACCTTGCAACTTCTCTTCAAGTTTGCAGGAAGTGGAAGGTGTTGGCCTCAGACAACATTCTATGGTCAAACCTATTCAAGGAGAGATGGGGAGAAGATCGTGCTGCATTCTATGCCCCTACTGGTTTGAAATCATGGAAAGATGTGTATGAAGCACAAGACCGGTGTGATCGAGTTGGATTGGGCCTGAAGATAATCAGAGAAGGTGTCGGCGACTACTACCTTGTCCACCAAGGCGAAATCCAACACCATCTAGGTTCCAAGAGACAAAGAAAGGGGGCAACTAATTGTTCATTCAGTTCAGAAACAGGCTTTATTGGAGAAGGATGCTCAAATGGAGAGGAACCCTGTTTGGGGATTCTGGACAAGATCCTTTTCTTCATTGGGGATTTGGAAGTTGCTTCAACAGATGCCAAACGCGGCAGAATACTGTAA | 492 | 0.4533 | MERLPGDLCLKIFYLLDHQNLATSLQVCRKWKVLASDNILWSNLFKERWGEDRAAFYAPTGLKSWKDVYEAQDRCDRVGLGLKIIREGVGDYYLVHQGEIQHHLGSKRQRKGATNCSFSSETGFIGEGCSNGEEPCLGILDKILFFIGDLEVASTDAKRGRIL* | 164 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi16g1300 | 163 | ProSiteProfiles | F-box domain profile. | 1 | 44 | IPR001810 | GO:0005515 | |
| Vvi16g1300 | 163 | Pfam | F-box-like | 2 | 45 | IPR001810 | GO:0005515 | |
| Vvi16g1300 | 163 | PANTHER | F-BOX ONLY PROTEIN 48-RELATED | 1 | 151 | IPR045118 | GO:0019005|GO:0031146 | |
| Vvi16g1300 | 163 | Gene3D | - | 1 | 78 | - | - | |
| Vvi16g1300 | 163 | SUPERFAMILY | F-box domain | 2 | 74 | IPR036047 | GO:0005515 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi16g1300 | - | - | vvi:100262355 | 341.658 |