Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1299 ATGGAGGTCTTCTACTTCCTTGTATTTGGTGCACTCTCTGCAGTTGTAGCTGTTATTGAGCTCAGCAAGAACAACAAGGACCGAGTCAATACCACCACGGCTTTCAATTCTTTCAAGAACAATTATCTTCTTGTCTACTCTCTCATGATGGCCGGGGATTGGTTGCAGGGTCCTTATGTGTACTTCCTCTACAGTACGTATGGCTTCGGAAAAGGGGAGATTGGACAGTTGTTTATTGCTGGTTTTGGGTCCTCCATGTTGTTTGGCACGATTGTTGGATCTCTAGCTGACAAACAGGGACGGAAGAGAGCTTGTGTGACTTATTGCATTACTTATATACTGAGCTGCATTACCAAGCATTCACCTCAGTACAGAATTTTAATGGTGGGGCGTGTGTTGGGAGGTATCGCCACTTCTCTCCTGTTTTCAGCATTTGAGTCATGGCTTGTTGCCGAGCACAACAAGAGGGGCTTTGAGCAACAGTGGTTGTCTGTGACATTTTCAAAGGCAATATTTCTTGGCAATGGCCTTGTTGCTATTCTCTCTGGGTTGTTTGGAAATCTACTAGTAGATAACTTGAGCCTTGGCCCTGTGGCCCCTTTTGATGCTGCTGCATGCTTTCTAGCTGTTGGTATGGCTGTCATTTTGTCATCATGGTCTGAAAACTACGGTGATCCTTCAGAGAACAAGGACTTGCTTACACAGTTCAAGGGAGCTGCTGTTGCCATAGCTTCTGATGAGAAAATTGCGTTGCTGGGTGCAATTCAGTCGTTGTTTGAAGGCTCAATGTATACTTTTGTGTTCCTCTGGACTCCTGCTCTAAGCCCAAATGAAGAGGAGATTCCCCATGGTTTCATCTTTGCAACTTTCATGTTGGCTTCAATGTTGGGAAGCTCTGTTGCTTCTCGACTGCTGGCCCGCGCATCACTCAAAGTTGAAAGTTACATGCAGATCGTTTTTGTGATCTCTTCTGCTTCTCTCCTGCTTCCCATTGTGACAAATATTTTGGTTGAACCTTCCAAGGTGAAAGGCGGAAGCATCTCATTTGCAGGTTGTGTCCAGCTTCTTGGCTTCTGCACATTCGAGGCTTGTGTGGGGATCTTCTGGCCGTCCATCATGAAGATGAGGTCCCAGTACATTCCAGAGGAGGCTAGAAGCACTATCATGAACTTCTTCCGCATTCCCCTCAATATCTTTGTGTGCATCGTGCTATATAATGTTAATGCATTCCCCATCACTGTCATGTTTGGCATGTGCTCGATTTTCCTCTTTGTGGCATCTATCTTGCAAAGGCGGCTCATGGTGATTGCTGACAAGTCAAAGACAGAAGATTGGGCATCAATGAAGGACAAAAATATGGAGGCAGAGCCATTGAACATCTGA 1383 0.4548 MEVFYFLVFGALSAVVAVIELSKNNKDRVNTTTAFNSFKNNYLLVYSLMMAGDWLQGPYVYFLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYRILMVGRVLGGIATSLLFSAFESWLVAEHNKRGFEQQWLSVTFSKAIFLGNGLVAILSGLFGNLLVDNLSLGPVAPFDAAACFLAVGMAVILSSWSENYGDPSENKDLLTQFKGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNEEEIPHGFIFATFMLASMLGSSVASRLLARASLKVESYMQIVFVISSASLLLPIVTNILVEPSKVKGGSISFAGCVQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCIVLYNVNAFPITVMFGMCSIFLFVASILQRRLMVIADKSKTEDWASMKDKNMEAEPLNI* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1299 460 Pfam Sugar-tranasporters, 12 TM 4 358 IPR008509 GO:0015098|GO:0015689|GO:0016020
Vvi16g1299 460 Gene3D MFS general substrate transporter like domains 42 431 IPR036259 -
Vvi16g1299 460 PANTHER SAM (S-ADENOSYL METHIONINE) TRANSPORTER 1 441 IPR008509 GO:0015098|GO:0015689|GO:0016020
Vvi16g1299 460 SUPERFAMILY MFS general substrate transporter 42 434 IPR036259 -
Vvi16g1299 460 CDD MFS_MFSD5_like 35 431 - -
Vvi16g1299 460 FunFam Molybdate-anion transporter 42 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1299 Vvi-Chr16 21544218 21547961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1299 K24175 - vvi:100267516 904.049