Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1297 ATGCCATTCTTTAATAAGAAAATTACAATAAATACCATTAATTTAATATACTGCGTCGTCGTTCGTATTTCAACTGTGGAGTCCCATCGGTCGATCCACCGAGTTCGCTTTACGAGTTGCTTCATCTCTGCAAAAGACTCTCTGATTTCAATCCTCCGATTCCTCAGGCTTCGTTTTCCGACTCCAGCTCTCAGTCAATTTGGTTTTTGCTCCACCAACTGTGAGGTTCCAATAAAGAAAGAAAATGGTCAGACAGTAATGGTCCCACTTTTTCAAAGTCAGGAAAACATTTCTGGAAAGATATCTATAGAACCACTTCAGGGAAAGAAGGTTGAACACAATGGTGTGAAAATTGAGCTCCTTGGTCAGATAGAGATGTATTTTGACAGAGGCAACTTCTATGATTTTACCTCCCTTGTTCGTGAACTGGATGTGCCTGGAGAAATATATGAAAGGAAAACATATCCATTTGAATTTTCTACAGTTGAAATGCCATACGAGACGTACAATGGGGTTAATGTGAGGCTTAGGTATGTCCTAAAAGTTACAATCAGTCGTGGCTATGGTGGTAGCATTGTGGAATACCAAGATTTTGTGGTTCGCAACTACACCCCACCTCCGGAAATTAACACTAGTATTAAGATGGAGGTTGGAATTGAAGATTGCCTACACATTGAGTTTGAGTACAATAAAAGCAAGTATCATCTGAAAGATGTTATTATCGGGAAGATATATTTTCTTCTTGTAAGAATCAAGATAAAAAATATGGATCTCGAGATCAGGCGGCGAGAGTCAACAGGATCAGGGGCCAACACCCATGTTGAGACAGAGACACTAGCAAAGTTTGAGTTGATGGATGGTGCTCCAGTAAGAGGTGAATCAATTCCAATTAGACTGTTTCTTAGTCCCTATGAGCTGACACCTACACACCGCAACATTAACAACAAATTCAGCGTCAAATATTATTTGAACCTTGTTCTTGTTGACGAAGAGGACCGTCGGTATTTCAAGCAGCAGGAGATCACAGTATACCGCCTTCCCGAAACTTCTTGA 1053 0.4036 MPFFNKKITINTINLIYCVVVRISTVESHRSIHRVRFTSCFISAKDSLISILRFLRLRFPTPALSQFGFCSTNCEVPIKKENGQTVMVPLFQSQENISGKISIEPLQGKKVEHNGVKIELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYETYNGVNVRLRYVLKVTISRGYGGSIVEYQDFVVRNYTPPPEINTSIKMEVGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMDLEIRRRESTGSGANTHVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITVYRLPETS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1297 350 Gene3D - 66 204 IPR014752 -
Vvi16g1297 350 FunFam vacuolar protein sorting-associated protein 26A 59 204 - -
Vvi16g1297 350 Pfam Vacuolar protein sorting-associated protein 26 72 332 IPR028934 GO:0006886
Vvi16g1297 350 Gene3D - 206 350 IPR014752 -
Vvi16g1297 350 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 74 347 IPR028934 GO:0006886
Vvi16g1297 350 FunFam Vacuolar protein sorting-associated protein 26 206 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1297 Vvi-Chr16 21530831 21537210 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1297 K18466 - vvi:100250336 554.673