Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1295 ATGGTGAGAGTGAACGGGGAAGAATCGAAGGAGATCGACGGAGTGGAACTGGAACAGCCTCAAGTTGCGCAAGAGGAGATGAGGAGAATTCCTCCATGGACGAAGCAGATCACCATACGGGGAATCATCGCCAGCGTAGTTATTGGAATAATCTACAGCGTGATAGTGACGAAGCTCAATCTCACAACTGGGCTCGTCCCAAATCTCAATGTTTCAGCAGCTCTGCTCGCCTTCGTCTTCATTGGGACATGGACAAAGTTGCTTCAGAAAGCAGGATTCGTCTCCACTCCTTTTACTCGACAGGAGAATACCGTCATTCAGACTTGTGCAGTCGCCTGTTACAGCATTGCTGTCGGAGGCGGTTTCGGGTCTTATCTGTTGGCGTTGAACAGGAGGACATATGAGCAAGCAGGTGTTGATACAGAAGGGAATACTCCAGGGAGCCATAAGGAACCCGGGGTTGGCTGGATGACTGGCTTCCTTTTTGCCACCTGCTTCGTCGGGCTGCTGGCCTTGGTGCCTCTGAGAAAGATCATGATAATAGACTATAAACTAACTTATCCAAGTGGAACTGCAACGGCAGTTCTCATCAATGGATTCCACACTCCTCATGGAGACAAGATTGCCAAGAAGCAGGTTCATGGGTTCGCAAAGTGTTTCTCCTTCAGTTTCTTCTGGGCTTTCTTCCAATGGTTCTATTCTGGTGGAGACAAATGTGGATTCGTTCAATTCCCGACGTTTGGACTGCAGGCTTGGAGTCAAACATTTTACTTCGATTTCAGTATGACTTACATTGGAGCAGGAATGATCTGCTCCTATCTTGTGAACTTGTCTTTACTCTTTGGCGCTGTGCTCTCTTGGGGATTAATGTGGCCATTGATGCGCCATAAGAAAGGAAATTGGTATCCTGCAACTCTATCACAAAGTAGTATGAAGGGCTTAAATGGCTACAAGGTTTTTATTTCGATCGCCCTCATCCTAGGAGACGGGCTCTACAATTTTGTTAAGATACTGCTTTTCACGGGCACAAGCATCATTAAAAGATTGAATAACAGGGGCTCAAATGCAATTTCTGATGAGAATAAGAACCAGACCATGGGTGATCTTCAAAGAAATGAAGTGTTCATAAGAGAGGGTATTCCCATATGGTTGGCATGTACAGGATACGTCACCTTCTCCATCATCTCCATCATTGTGATCCCCCTCATGTTCCCCGAGCTGAAATGGTACTATGTGGTTGTTGCCTACACTCTTGCTCCCTCTCTTGGCTTCTGCAATGCTTATGGTGCAGGCCTAACCGACATGAACATGGCATATAATTATGGAAAAGTAGCCCTGTTTGTTCTTGCTGCCTTGGCAGGGAAGGATTCAGGCGTCGTTGCAGGGCTAGTTGGCTGTGGCCTGATTAAGTCCATTGTTTCCATATCTTCTGATTTGATGCATGATTTCAAGACTGGCCATCTCACTCTCACTTCCCCTCGATCAATGCTCCTTAGCCAGGCCATTGGGACGGCAATAGGCTGTGTGGTGGCTCCTCTCACATTCTTCCTCTTCTACAAGGCCTTTGATGTGGGGAACCCAGATGGAGAATACAAAGCCCCTTATGCTATCATTTACAGGAACATGGCAATTCTAGGAGTTGAAGGCTTCTCAGCCCTTCCCCACCACTGCCTCCAGCTCTGTTGCGGCTTTTTCATCTTTGCCATAGCAGCCAACTTGGTGAGAGACCTTTCCCCATCAAAGATTGGAAAATGGATTCCTCTCCCAATGGCCATGGCTGTGCCTTTCCTTGTTGGTGCCTACTTTGCTATAGATATGTGCATGGGGAGTTTGGTTGTTTTTGTGTGGCACAAGGTCAACAGCAAGAAGGCGAGTTTGATGGTTCCTGCAGTCGCCTCTGGTTTGATCTGTGGAGATGGATTGTGGATTCTCCCTTCCTCAGTCCTCGCCCTGGCTAAGATTAATCCTCCAATCTGTATGAGCTTCTTGGCGACTTAG 1998 0.4735 MVRVNGEESKEIDGVELEQPQVAQEEMRRIPPWTKQITIRGIIASVVIGIIYSVIVTKLNLTTGLVPNLNVSAALLAFVFIGTWTKLLQKAGFVSTPFTRQENTVIQTCAVACYSIAVGGGFGSYLLALNRRTYEQAGVDTEGNTPGSHKEPGVGWMTGFLFATCFVGLLALVPLRKIMIIDYKLTYPSGTATAVLINGFHTPHGDKIAKKQVHGFAKCFSFSFFWAFFQWFYSGGDKCGFVQFPTFGLQAWSQTFYFDFSMTYIGAGMICSYLVNLSLLFGAVLSWGLMWPLMRHKKGNWYPATLSQSSMKGLNGYKVFISIALILGDGLYNFVKILLFTGTSIIKRLNNRGSNAISDENKNQTMGDLQRNEVFIREGIPIWLACTGYVTFSIISIIVIPLMFPELKWYYVVVAYTLAPSLGFCNAYGAGLTDMNMAYNYGKVALFVLAALAGKDSGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLLSQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIIYRNMAILGVEGFSALPHHCLQLCCGFFIFAIAANLVRDLSPSKIGKWIPLPMAMAVPFLVGAYFAIDMCMGSLVVFVWHKVNSKKASLMVPAVASGLICGDGLWILPSSVLALAKINPPICMSFLAT* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1295 665 Pfam OPT oligopeptide transporter protein 36 649 IPR004813 GO:0035673
Vvi16g1295 665 NCBIfam OPT family oligopeptide transporter 32 645 IPR004813 GO:0035673
Vvi16g1295 665 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 23 663 IPR045035 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1295 Vvi-Chr16 21495262 21498371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1295 - - vvi:100255514 1321.99