Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1288 ATGGCCATCTCAACGCTGTCACCCACTGCATATTTCAGCTCTTTCAGCCCCTCAAATGACTCTCTCATCTCATCTTCACCCTTCAAACCCTTCAAACTCCCAACCTTGTGGCCATGGCAGAAGGTAAAAATGGGGCCACTGACTGTATCTCCAATGGGATTTGGGACATGGGCATGGGGGAATCAGCTTCTCTGGGGGTATCAGGAATCAATGGACAGTGACCTTCAAAGGACTTTCAACCTAGCTGTGGAGAATGGGATCAACCTTTTTGATACTGCTGATTCCTATGGCACTGGTAGGCTAAATGGGCAAAGTGAAAAGCTTCTTGGGAAGTTCATCCGGCAAAAGCAGATACAGGATAACATTGTGATTGCAACAAAGTTTGCAGCATATCCATGGCGTCTCACACCTGGGCAGTTTGTGAATGCGTGCAAGTCTTCCCTTGATCGGATGCAGCTTGAACAAATTGGAATAGGGCAACTGCATTGGTCAACTGCAAACTATGCTCCTTTGCAGGAGTTGGCTCTTTGGGATGGTTTAGTAGCAATGTATGAGAAGGGTTTAGTTCGTGCAGTTGGGGTGAGCAATTATGGCCCAAAGCAGCTTGTAAAGATACACGATTACCTCAAAGCTCGAGGAGTCCCCCTATGCTCAGCTCAGGTTCAATTTTCTTTGCTAAGCAAGGGAGAAGATCAGATAGAGATCAAGAACATATGTGGTTCTCTCGGTATACGCTTGATTTCTTATAGTCCTCTGGGGCTTGGCATGCTTACTGGGAAATATACACCTTCCAAACTTCCACGAGGACCTCGGGCCCTGCTATTCAGGCAAATTCTTCCAGGATTGGAGCCTTTGTTGAATTCACTAAGAGAAATTGCACAAAAAAGGCGTAAAACTATTCCACAAGTTGCCATAAACTGGTGCATCTGCCAAGGCACAATTCCAATACCTGGGGTTAAAACAGTAAAACAGGTGGAAGAAAACCTGGGAGCTCTTGGTTGGCGCCTTAGTTCTGACGAGTTGCTTCAGTTAGAAGATGCGGCGCGGGAATCTCCCGGGAAAATGATACAGAACATTTTCCAGACAAGATGA 1092 0.4625 MAISTLSPTAYFSSFSPSNDSLISSSPFKPFKLPTLWPWQKVKMGPLTVSPMGFGTWAWGNQLLWGYQESMDSDLQRTFNLAVENGINLFDTADSYGTGRLNGQSEKLLGKFIRQKQIQDNIVIATKFAAYPWRLTPGQFVNACKSSLDRMQLEQIGIGQLHWSTANYAPLQELALWDGLVAMYEKGLVRAVGVSNYGPKQLVKIHDYLKARGVPLCSAQVQFSLLSKGEDQIEIKNICGSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLEPLLNSLREIAQKRRKTIPQVAINWCICQGTIPIPGVKTVKQVEENLGALGWRLSSDELLQLEDAARESPGKMIQNIFQTR* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1288 363 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 41 349 - -
Vvi16g1288 363 CDD AKR_AtPLR-like 49 345 - -
Vvi16g1288 363 PRINTS Aldo-keto reductase signature 180 197 IPR020471 GO:0016491
Vvi16g1288 363 PRINTS Aldo-keto reductase signature 146 164 IPR020471 GO:0016491
Vvi16g1288 363 PRINTS Aldo-keto reductase signature 82 106 IPR020471 GO:0016491
Vvi16g1288 363 ProSitePatterns Aldo/keto reductase family signature 2. 180 197 IPR018170 GO:0016491
Vvi16g1288 363 SUPERFAMILY NAD(P)-linked oxidoreductase 47 349 IPR036812 -
Vvi16g1288 363 Pfam Aldo/keto reductase family 51 346 IPR023210 -
Vvi16g1288 363 Gene3D - 41 352 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1288 Vvi-Chr16 21441875 21446927 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1288 K05275 - vvi:100258867 720.694