Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1276 ATGGCTTCTCTCAAGGCTTTCCCATTTTCATCTTCGCCTCTGGCAACCCACAAACCAAGCCTTTCAAAGGGGGTGGCGGGGGCTCCGTGCTCTGCTTTCTTCCCTTCTTCTCGCCATGGCGGGCGCTCTAGGCTGGCTCTTGTGAGAGCCGAAGCCACGGGAGAGAACAAAGACGCATCCCTCGACGTCCAGGTGCATCAAGGCAACAAGGGCGCCACCGCAGTTGAACGCCAGCCTCGTCGTCTGGCTTTGGATATCTCACCTTTTGGGCTGTTGGACCCCTTCTCTCCAATGAGGACCATGCGCCAAATGATGGACGCAATGGACCGGATGTTTGAAGAGACGGTGGCATTCCCCGGCTCGGCGGAGGTGCGCTCGCCGTGGGATATCGTGGACGACGAGAACGAAATCAAGATGCGGTTCGATATGCCGGGGCTGTCGAAGGAGGACGTCAAAGTGTCGGTGGAGGATGACTTGCTTGTGATAAAGGGGGAGCAGAAGAAGGAAGAAGGTGAGAAAGATTCATGGTCTGGGAGCGGCTTCAGCTCGTACAGCACACGCCTGCAGCTACCTGATAACTGTGAGAAGGACAAGATAAAAGCGGAGCTGAAGAATGGGGTTCTTTCGATCTCCATTCCTAAGACCAAGGTAGAGCGCAAGGTCATTGATGTGCAGATTCAGTGA 684 0.5526 MASLKAFPFSSSPLATHKPSLSKGVAGAPCSAFFPSSRHGGRSRLALVRAEATGENKDASLDVQVHQGNKGATAVERQPRRLALDISPFGLLDPFSPMRTMRQMMDAMDRMFEETVAFPGSAEVRSPWDIVDDENEIKMRFDMPGLSKEDVKVSVEDDLLVIKGEQKKEEGEKDSWSGSGFSSYSTRLQLPDNCEKDKIKAELKNGVLSISIPKTKVERKVIDVQIQ* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1276 227 CDD ACD_sHsps-like 129 214 - -
Vvi16g1276 227 FunFam 26.5 kDa heat shock protein, mitochondrial 90 226 - -
Vvi16g1276 227 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 119 227 IPR002068 -
Vvi16g1276 227 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 10 227 IPR044587 GO:0009408
Vvi16g1276 227 SUPERFAMILY HSP20-like chaperones 93 225 IPR008978 -
Vvi16g1276 227 Gene3D - 89 227 IPR008978 -
Vvi16g1276 227 MobiDBLite consensus disorder prediction 164 187 - -
Vvi16g1276 227 Pfam Hsp20/alpha crystallin family 129 227 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1276 Vvi-Chr16 21339256 21340019 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1276 K13993 - vvi:100267630 433.335