Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1275 ATGATTTTTCATTGGAAATCACTGCTACTATTCTCTTGTGCCCACTTGCTCCTTTTTTATTGTCTTCTGGGCTCTTGTTTGTTTGGAGTTGTGGTGGTGGTGAGGTGGTTGTGGTGGTATTCATGTCTCATCCAAGGCAGTATCAAATGGTGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAAGGATATGGCTTTGTAACATTCAAGGATCCAGATTCAGCAATGAGAGCTTGCCAAGATCCCTCCCCTGTCATTGATGGAAGGAGAGCCAATTGCAATATTGCCTCTCTTGGTGCCCACAAGACTCGCCCTCCTCCCCATCATGGAATGGAGAGACTCAGACCAGCATCAGGATCAATGGGAAAACCCAGCCACCATGGCTCCTCAACAAATTTCCGTCAATCCAATCCCCATTTTTCATTCCCCCCTTACTCTGTCTATGGGTACTCTGGTTATCCACAAGAACTATATGCAATGAACTACTACAATGCATATAGTGGGCAGCAGATGTCATCCTACTACTCCTCACCTTCGGGTACGCCTGGAGTTTACTACGGTTACTATCCAGTCTACACTCAGCAAGGCCAGAGCAGCCAAATGCAAGGTTTTGGAATTCAGTACCCACAAACAACACAGTACCCTTACTTGCCTCAGCCATACCAGGCTGTTGGGATCTTACCACTTCCAGCTTCAGCTTCTGCTTCAGCTTCAGCTTCCCTGGGAGCCACTGCCACTGGTGCAGCCACAGCAGCAGGGGAAGTGACAAGGACTGCTGCAGCCTCTGAGCAGGGTTCATAA 876 0.4292 MIFHWKSLLLFSCAHLLLFYCLLGSCLFGVVVVVRWLWWYSCLIQGSIKWWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGYGFVTFKDPDSAMRACQDPSPVIDGRRANCNIASLGAHKTRPPPHHGMERLRPASGSMGKPSHHGSSTNFRQSNPHFSFPPYSVYGYSGYPQELYAMNYYNAYSGQQMSSYYSSPSGTPGVYYGYYPVYTQQGQSSQMQGFGIQYPQTTQYPYLPQPYQAVGILPLPASASASASASLGATATGAATAAGEVTRTAAASEQGS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1275 291 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vvi16g1275 291 SUPERFAMILY RNA-binding domain, RBD 85 133 IPR035979 GO:0003676
Vvi16g1275 291 PANTHER BOULE-RELATED 85 268 - -
Vvi16g1275 291 MobiDBLite consensus disorder prediction 129 160 - -
Vvi16g1275 291 Gene3D - 79 127 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1275 Vvi-Chr16 21329695 21331591 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1275 - - vri:117933008 306.605