Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1259 ATGTCTCCACCGTCCCCGCCTCCCCCTCCGCCGAAGCCACCGCAGCAGGCGCCGATCAGCAACTGCCACAGCAACCTCTGTAAGCACCTGCCCAAACCCACATCGCTGCCTGATCTGTTCTTCACTGCTCTCTCCCTCCTCTTCCTCTTCCCTTCCTCCCCTAAACCCCAGACCCTCTTTTCGAAGATCTCCTCCCTCTCTTTCCCTCAAAACCCTCGTCGCTTTCTCAAAACCCCCACCATGATCTCACCCTCGAATCCTAAACCCATCACCCAGTTCTCATCCCCGCAGTCTCTCACCGATTGGCTCAAGCATCGTCTCCCCTCCGACTCCTTCGCTTCTTGGGGGGTCAAGCCCGGCACCAAGAATGTCCACAATCTCTGGCTTGAGCTCTCCGAGGGCGAAACCTCGCTCGCCGATTCCATTCCTCCTATCCGTACAGTACGTGTCGTCACGGTTCGGATTATCAGCGAAGACAACCGAATTCTCCTCGAGTCGCACCAGGAATTGTCAGACGGCACAATTCGGGAACGATGCCGGCCCTTGTCGGAGAAAATGAAGCCCGGCGAGACCCTTGAATGCGCTGTTCATCGGGCGGTTAAGGAAGAGCTAGGATCGATAATTCAGGGCAATGGGAATGTGAGGATTGTGCCGGGGTCGTATGAGCAGAAGGTGGAGGAGAGGGTTTCGGCTTCCTACCCGGGTTTGCCGGCCTGTTATGTGTTGCATTCTGTGAATGCGTGGGTCGATGGATTACCTGACGGAGAATTTTGTACGGAAGAGGAAGAATATAGGGATTGGAATGGGATGGGCATTGCAGAGATGGCCGTTTCTGTGAAAAGGCATTACTGGAAATGGGTTGATTTTGATTCAGTGTGA 879 0.5472 MSPPSPPPPPPKPPQQAPISNCHSNLCKHLPKPTSLPDLFFTALSLLFLFPSSPKPQTLFSKISSLSFPQNPRRFLKTPTMISPSNPKPITQFSSPQSLTDWLKHRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSIPPIRTVRVVTVRIISEDNRILLESHQELSDGTIRERCRPLSEKMKPGETLECAVHRAVKEELGSIIQGNGNVRIVPGSYEQKVEERVSASYPGLPACYVLHSVNAWVDGLPDGEFCTEEEEYRDWNGMGIAEMAVSVKRHYWKWVDFDSV* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1259 292 Pfam NUDIX domain 149 223 IPR000086 -
Vvi16g1259 292 SUPERFAMILY Nudix 143 276 IPR015797 -
Vvi16g1259 292 PANTHER RING-H2 ZINC FINGER PROTEIN 13 291 - -
Vvi16g1259 292 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 148 289 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1259 - - vvi:100854009 554.288