Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1257 ATGGAATCAAAGGTGTTGTCCACCGGAATCCGGTACTTGACCTTGCCACAAAGTTACATCAGGCCAGAGCCGGAGAGGCCGAGACTCTCCCAAGTGAGTGAGTGTAAACATGTCCCCATAATCGACCTCGGCAAGGACGTAAACAGGGCCCAACTCATCCAACACATCGCCGATGCTTGCAGGCTCTATGGTTTTTTCCAGGTGATCAATCATGGGGTAGCTGCAGAAATGATGGAGAAAATGTTGGAGGTGGCCGATGAGTTCTACAGACTGCCGGTGGAGGAGAAGATGAAGCTGTATTCCGATGATCCCACCAAGACAATGAGGTTGTCAACCAGCTTTAATGTGAATAAGGAGAAGGTCCATAACTGGAGAGATTATCTCAGACTCCATTGTTATCCTCTGGATCAGTACACGCCTGAGTGGCCTTCCAATCCTCCTTCCTTCAAGGAAATTGTGAGTAGTTATTGCAAAGAGGTAAGAGAACTTGGGTTCAGACTACAAGAAATGATATCAGAGAGTTTAGGCTTGGAAAAGGATCATATAAAGAATGTTTTTGGTGAACAAGGGCAACACATGGCTGTAAACTATTATCCGCCATGTCCACAACCCGAGCTCACTTATGGATTGCCAGGACACACAGACCCCAACGCCCTTACCATTCTTCTTCAAGACCTACGAGTGGCAGGTCTTCAAGTTCTCAAGGATGGTACTTGGCTCGCTATCAAGCCACATCCCGGTGCTTTTGTCGTCAATATAGGCGATCAATTACAGGCTGTGAGTAATGGGAAATACAAAAGTGTATGGCATAGGGCCGTTGTGAATGCAGAGAGTGAAAGGCTATCAGTGGCTTCTTTCCTCTGCCCATGCAATGATGCAGTAATTGGCCCTGCAAAGCCTCTCACAGAAGATGGATCTGCACCCATTTACAAGAATTTCACATATGCTGAGTATTACAAGAAGTTCTGGGGCAGGGACTTGGATCAAGAACATTGCTTGGAACTATTCAAGAACTAG 1017 0.4651 MESKVLSTGIRYLTLPQSYIRPEPERPRLSQVSECKHVPIIDLGKDVNRAQLIQHIADACRLYGFFQVINHGVAAEMMEKMLEVADEFYRLPVEEKMKLYSDDPTKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLDQYTPEWPSNPPSFKEIVSSYCKEVRELGFRLQEMISESLGLEKDHIKNVFGEQGQHMAVNYYPPCPQPELTYGLPGHTDPNALTILLQDLRVAGLQVLKDGTWLAIKPHPGAFVVNIGDQLQAVSNGKYKSVWHRAVVNAESERLSVASFLCPCNDAVIGPAKPLTEDGSAPIYKNFTYAEYYKKFWGRDLDQEHCLELFKN* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1257 338 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 189 289 IPR005123 -
Vvi16g1257 338 Pfam 2OG-Fe(II) oxygenase superfamily 191 289 IPR044861 -
Vvi16g1257 338 Gene3D - 5 326 IPR027443 -
Vvi16g1257 338 SUPERFAMILY Clavaminate synthase-like 14 326 - -
Vvi16g1257 338 FunFam Protein DMR6-like oxygenase 2 3 326 - -
Vvi16g1257 338 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 33 316 - -
Vvi16g1257 338 Pfam non-haem dioxygenase in morphine synthesis N-terminal 38 144 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1257 Vvi-Chr16 21183240 21186735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1257 15 337 Glycosyltransferase AT5G59530 35.608 1.78e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1257 K24028 - vvi:100854106 704.516