Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1240 ATGGGGTTTGGGGAAGATGAAGAATCAGTGGTGGGGTTGCCCAACAAATCCATATTCAGATACAATTCTCCACTGGTTCAGGTCTGTCTGATTGGCTTGGTATGCTTCTGCTGTCCAGGCATGTTCAACGCCCTCTCTGGGATGGGGGGAGGTGGGCAGGTGGACGCCACCGCCGCCAATAACGCCAACACCGCCCTCTACACCACCTTCGCCATCTTCGGCGTCTTGGGTGGTGGCATCTACAACATCTTCGGTCCCCGCTTCACCCTCTTCGCCGGTTGCTCAACCTACGTCCTCTACGCCGGCTCTTTCCTTTACTACAACCACTACCAGCACCAGGCCTTCGCCATTGTCGCCGGCGCCATCCTCGGAATCGGAGCAGGACTGCTCTGGGCGGGGCAGGGAGCTATCATGACGTCGTACCCCCCGCCGGGGAGGAAGGGTTCATACATATCGCTGTTCTGGAGCATCTTCAATATGGGAGGCGTCGTCGGCGGGCTCATCCCCTTCATTCTGAACTACAACCGGAGCGAGGCTGCGTCCGTGAACGACGGTACTTACATTGGGTTCATGTGCTTCATGTCTGTCGGCACCGTCCTCACGCTGGCGATCCTGCACCCGAGCCGCGTGGTTCGGGACGACGGCAGCCACTGTACCAACATCAAGTACTCCGATGTGTCGACGGAGGCCGTCGAGATTCTGAAGCTGTTCCGGAATTGGAAGATGCTGCTGATGGTCCCGGCGGCATGGGCCAGCAACTTCTTCTACACCTACCAGTTCAATCATGTGAACGCTTTTCTCTTCAATCTGAGGACCAGAGGCTTCAACAATGTGTTCTACTGGGGAGCCCAGATGGTGGGCTCTGTGGGGATTGGGTATATCCTGGATTTCAGTTTCCAGAGCAGGAAGAAGAGGGGTTTTGTGGGGATTGGGGTTGTTGGTCTGCTTGCAACTGCAATTTGGGCTGGTGGCCTTGCCAACCATCTCCACTATGACCGGACTCTGACCCACAAACTGGACTTCAAGGACTCTGGTTCTGAATATGCAGGTCCATTTGTGTTGTATTTTAGCTATGGATTGCTGGATGCCATGTTCCAGAGCTTGGTTTACTGGGTGATTGGAGCCCTGGCTGACGATTCAGAGACCCTTAGCAGATACATTGGGTTCTACAAAGGGGTTCAGAGTGCAGGGGGAGCAGTTGCTTGGCAAATTGATGCACATAATGTCAAAAAGCTGTCCCAGCTGATTGTGAATTGGGTGCTCACCTCAGTGAGTTACCCATTGTTGGCAATTCTTGTCATGTTGGCTGTGAAGGATGAAAAGAAAGTTGAAACCAAGGAGGATGATGATGCGTTTGCATCTGCAAAAGCTCCCACTGCAGAAGAAATAACTGGGGGGGAATTCAGCAAGCCAGCCTAA 1419 0.537 MGFGEDEESVVGLPNKSIFRYNSPLVQVCLIGLVCFCCPGMFNALSGMGGGGQVDATAANNANTALYTTFAIFGVLGGGIYNIFGPRFTLFAGCSTYVLYAGSFLYYNHYQHQAFAIVAGAILGIGAGLLWAGQGAIMTSYPPPGRKGSYISLFWSIFNMGGVVGGLIPFILNYNRSEAASVNDGTYIGFMCFMSVGTVLTLAILHPSRVVRDDGSHCTNIKYSDVSTEAVEILKLFRNWKMLLMVPAAWASNFFYTYQFNHVNAFLFNLRTRGFNNVFYWGAQMVGSVGIGYILDFSFQSRKKRGFVGIGVVGLLATAIWAGGLANHLHYDRTLTHKLDFKDSGSEYAGPFVLYFSYGLLDAMFQSLVYWVIGALADDSETLSRYIGFYKGVQSAGGAVAWQIDAHNVKKLSQLIVNWVLTSVSYPLLAILVMLAVKDEKKVETKEDDDAFASAKAPTAEEITGGEFSKPA* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1240 472 Pfam Ion channel regulatory protein UNC-93 53 249 IPR010291 -
Vvi16g1240 472 SUPERFAMILY MFS general substrate transporter 38 445 IPR036259 -
Vvi16g1240 472 CDD MFS_unc93-like 26 438 - -
Vvi16g1240 472 MobiDBLite consensus disorder prediction 444 472 - -
Vvi16g1240 472 PANTHER ET TRANSLATION PRODUCT-RELATED 25 444 - -
Vvi16g1240 472 Gene3D MFS general substrate transporter like domains 24 212 IPR036259 -
Vvi16g1240 472 Gene3D MFS general substrate transporter like domains 236 448 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1240 Vvi-Chr16 21079042 21080875 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1240 - - vvi:100264126 923.309