Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi16g1238 | ATGGTGGGGTTTAAGAATAGGTATATGATAATGGAGGTTTTTTTGGACCCGAACCGAGATCTTGCGGTTGATGATCCCATTATAATTACACAGTTTAATGTGTCAAAAGCAATCAAAGACAGCATTCTTGTAAACTTTGGGGAGTGTGGTCTGGCTTCATCTTTTGGGTCATTCCAAGTCAAGTATGTGAATCCCATTACAAAGCTGTGTATCATCAGAGCATCAAGGGAGGAGTATCAAAAAGTTTGGTCTGCCATTACTATGGTTAAGAGTATCGGACATTGCCCAGTGCTATTCAATTTGTTGGACCTAAGTGGAAGTATCAGAGCATGTAGAAATGCTGCCTTAAAATGTGACAAAGCAAAGTTTGAGCAGTACAAGCTTGTAGTTGGAGATCGCCTCACAGACGACATCAATAACCAAATGCAGAACTGTCTTGAGAGGATCAAAATCCTGGAGCACTGA | 465 | 0.4086 | MVGFKNRYMIMEVFLDPNRDLAVDDPIIITQFNVSKAIKDSILVNFGECGLASSFGSFQVKYVNPITKLCIIRASREEYQKVWSAITMVKSIGHCPVLFNLLDLSGSIRACRNAALKCDKAKFEQYKLVVGDRLTDDINNQMQNCLERIKILEH* | 155 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi16g1238 | 154 | FunFam | Ribonuclease P/MRP protein subunit POP5 | 1 | 120 | - | - | |
| Vvi16g1238 | 154 | PIRSF | RNase_P | 1 | 152 | IPR016819 | GO:0001682|GO:0033204 | |
| Vvi16g1238 | 154 | Coils | Coil | 135 | 154 | - | - | |
| Vvi16g1238 | 154 | PANTHER | RIBONUCLEASE P PROTEIN SUBUNIT P14 | 1 | 145 | - | - | |
| Vvi16g1238 | 154 | Gene3D | Ribonuclease P, Pop5 subunit | 1 | 120 | IPR038085 | - | |
| Vvi16g1238 | 154 | SUPERFAMILY | Rnp2-like | 1 | 120 | IPR038085 | - | |
| Vvi16g1238 | 154 | Pfam | Rpp14/Pop5 family | 7 | 115 | IPR002759 | GO:0001682|GO:0030677 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi16g1238 | K03537 | - | vvi:100257250 | 311.612 |