Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1233 ATGGAGAGAAAGCTGAAGTTGGATGGATCTCCCAGTGGATCAGTTGCTAATCAAGAAACCTCCAAGCCTTCAATGGGGAAAGGAAAAGGAAATGAAGGTAAAACAATGAAGAAAAATGTGAGGTTTAATCTACCTGCAAGTGACTTGAAGCCTTCAATGGAAAAAAGAGATCAAGTGGATGAAGACAGCTCGAAGGCAAAAAAGGTGGAGAAAATGGGGGGCGGATCCAGTCTATGTCTGTGGTTACCAATGAGCAGAAGCAGAAGCAGTAGCAAAGACCGGACTCCTACCCTCATCTTCAGTAAGAGGCTAACCTTCGGCGATCTCCTCACCGGAAAGCTCAGGGTTCCTTCACTTGTTTTTTTACCGAAGAAACATGAAGGAAAACATGGCAGGATGATGGTACCATTTGTGGACAGTAAGGGAGAGTTCTGGGAGCTGGAGGCTACACCACAGTGGTTTTCATTGAACCTGGACAAATTTGTGAAGGCACATGGATTGAAATGCGACGATGTGATTCTTTTCTACGAAGATGGCCCCAATTCTAGGTACTACGTCATTGACTATGAAAGAACTGGGTGCTGA 585 0.4496 MERKLKLDGSPSGSVANQETSKPSMGKGKGNEGKTMKKNVRFNLPASDLKPSMEKRDQVDEDSSKAKKVEKMGGGSSLCLWLPMSRSRSSSKDRTPTLIFSKRLTFGDLLTGKLRVPSLVFLPKKHEGKHGRMMVPFVDSKGEFWELEATPQWFSLNLDKFVKAHGLKCDDVILFYEDGPNSRYYVIDYERTGC* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1233 194 Gene3D - 87 193 IPR015300 -
Vvi16g1233 194 MobiDBLite consensus disorder prediction 11 25 - -
Vvi16g1233 194 MobiDBLite consensus disorder prediction 1 71 - -
Vvi16g1233 194 CDD B3_DNA 99 186 IPR003340 GO:0003677
Vvi16g1233 194 MobiDBLite consensus disorder prediction 50 69 - -
Vvi16g1233 194 SUPERFAMILY DNA-binding pseudobarrel domain 95 194 IPR015300 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1233 - K08789 vvi:109124212 399.438