Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1229 ATGCGTTCATCGCCTTGCCCTTTCTGTCGTCTCACGTTCCCCGCCTCTCAACTTCAGAGGCATGCGAATGATCACTTGGAGGAGGAGGAACTCAGAAGGGACATGGAGTTTGCCCAGGAAATTGCTATTGCCCCAACTAGCCCACCCAAAACCCTGAATAATCCAGTGGAGCATGGCATGTTATTTGAAACAAGCTCTAGAAAAACTTATGAAAGAAGCAGCTCAAGGTCTGATGAGAGTAGTAATTGCAGTGGAGAAATGTCCATTGATGAAAAGGTTTTTCACTTAGCTCGTTTACAAATTAGGAGCACCTTCTACAGAGTTGAAGATGGTTTGATGGCCTTGTTGAGAAACTGCTTGGAATCAGAACTAGGAAACTCAACCTGTATATTGTCTGGCTCTGTTATTCATTTTCAAAGCATTGAATCAGAGGATGTTGGGTGGGGTTGTGGTTGGCGTAATATCCAAATGCTCAGCTCTCACTTGGTTATGCAAAGACAAGAAGCAAGGCAAGTTTTGTTTGGTGGTTCAGGATTCATTCCTGATATACCATCACTCCAAAGATGGCTTGAGATTGCTTGGGAAAGAGATTTCGATACAGTTGGCTCGGAGCATTTCAATCACAAAATATATGGCACAACAAATTGGATTGGAACCACTGAATGTGCTGCACTATTTCGTTCTTTTGGTCTGCGGGCAAGGATAGTGGATTTTGGTCCTAAGGAAATTAAATCACCATATCCTCAAAAAAATAGTCGGGGCAAGAGGAAAGCAGATGAAGTTTGTGGACCAATTGACAAATTTCTACTTCGAAGGGAACCAAGGGATCAAGATATTTCCCAACCAGGTTCCAGCAGGCATGATTCGTGTAACTTGGCAGACAGTACAGAGTCTGATAAATGTTTCACAAGGAATGATAAAGGTCGTCAAGTTCTTGTTGATTGGGTATGGAATTATTTCTCTGACAATAAGTTCGCCAAATCAGGCAGCAATGATGTTATTGTCACTGACAAAGCGCCCTTGTACTTTCAGCATGATGGCCATTCGAGAACCATCGTTGGAATTCAAGTCAAACATCAGCTCAATGGGATGCATCAATACAACCTATTAATTTTGGACCCTACTCATAAAACAGCAGCTCTGGAAAGATCACTTAAAGAAAATGTTGGATGGCAGAAGTTTATTAAAAGAGGGGTTCACACACTGAAAAAGCTGCAATACCAGTTATGTCATATTGATCCTGGCATTGCCCATGCTGAGGAGTTGGAGCAGCTCAAGACCTTGGACAGCATTTTTCTTGAATTCTAG 1308 0.4228 MRSSPCPFCRLTFPASQLQRHANDHLEEEELRRDMEFAQEIAIAPTSPPKTLNNPVEHGMLFETSSRKTYERSSSRSDESSNCSGEMSIDEKVFHLARLQIRSTFYRVEDGLMALLRNCLESELGNSTCILSGSVIHFQSIESEDVGWGCGWRNIQMLSSHLVMQRQEARQVLFGGSGFIPDIPSLQRWLEIAWERDFDTVGSEHFNHKIYGTTNWIGTTECAALFRSFGLRARIVDFGPKEIKSPYPQKNSRGKRKADEVCGPIDKFLLRREPRDQDISQPGSSRHDSCNLADSTESDKCFTRNDKGRQVLVDWVWNYFSDNKFAKSGSNDVIVTDKAPLYFQHDGHSRTIVGIQVKHQLNGMHQYNLLILDPTHKTAALERSLKENVGWQKFIKRGVHTLKKLQYQLCHIDPGIAHAEELEQLKTLDSIFLEF* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1229 435 Gene3D - 292 416 - -
Vvi16g1229 435 Gene3D - 114 250 - -
Vvi16g1229 435 MobiDBLite consensus disorder prediction 63 85 - -
Vvi16g1229 435 Pfam Peptidase family C78 127 410 IPR012462 -
Vvi16g1229 435 PANTHER ZINC FINGER PROTEIN 88 421 - -
Vvi16g1229 435 MobiDBLite consensus disorder prediction 273 295 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1229 K24134 - vvi:100250322 893.264