Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1227 ATGGGTCGTGGAGTTAGCAGTGGTGGAGGACAAAGTTCCTTGGGTTACCTGTTTGGGAGTGGAGAGGCACCAAAACCAGCCTCAAACAATGCCCCAGTGCCTCCAAGTGAAGCTCCTGCTGTAAATAATGGACCATCCCCCAAGCCTACCGCTCCTGCTCAACCAGTAGATGTTACCAAACAGATTCCGGCAGGTATCCATGGTAATCTGGCAAATAACTACTACCGAGCAGATGGTCAGAACTGTGGAAACTTCATCACGGATCGTCCCTCAACTAAGGTCCATGCTGCTCCAGGTGGTGGATCATCCTTGGGTTACCTCTTTGGTGGTGGTGGTGGTAGTGGTAATTGA 351 0.51 MGRGVSSGGGQSSLGYLFGSGEAPKPASNNAPVPPSEAPAVNNGPSPKPTAPAQPVDVTKQIPAGIHGNLANNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFGGGGGSGN* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1227 116 MobiDBLite consensus disorder prediction 28 52 - -
Vvi16g1227 116 MobiDBLite consensus disorder prediction 93 116 - -
Vvi16g1227 116 PANTHER SPR1 1 109 IPR039613 GO:0043622
Vvi16g1227 116 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1227 Vvi-Chr16 20998954 21000803 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1227 K18635 - vvi:100245217 187.963