Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1223 ATGGGTGATCTTCAAGTCATTGGCGGAATAAAAAAGCTCAACAACCAAAATTACAATACTTGGTCAACATGCATGATGTCGTACATGCAAGGCCAAGACTTGTGGGAGGTTGTGAACGGAAGCGAAATTACTCAACCAAAGGTTGAGGATGCGAATGGTATACTGCGAAAATGGAAGATAAAAGCGGGCAAAGCGATGTTTGCTTTGAAGACAACGATCGAAGAAGATGTGCTAGAGCATATTCGAGATGCCAAAACCCCTTACGAGGCTTGGAATACGTTCACCAAGCTGTTCTCAAAGAAGAATGACACAAGGCTCCAACTTCTAGAGAGCGAGTTGTTTTCGGTAGCACAGCGTGACTTGACAATCGCTCAATACTTTCACAAGGTGAAGACGTTATGCCGGGAAATTTCTGAGTTGGATCTAGAAGCCCCAATCGGTGAAACCAGGATGAAGAGAATAATCATCCATGGTTTGAGACCAGAATTTAGAGGTTTTGTTGCTGCTATACAAGGATGGCAAAATCAACCATCACTTGTTGAGTTTGAGAATTTGCTAGCTGGTCAAGAAGCCTTGGCTAAACAAATGGGAGGAGTTTCACTCAAGGGTGAAGAGGAAGCGCTTTATGCCCACAAAGGCGGGTGGAATTCCCAGCAGCACACCGTCAGAAGAACTAAAAAGAATGAGGACAAGGCAAAGTGTAGTCAAGGTGAAAGGAGCGCTCGTGTTGAGGGAGATTCGAAGAATCCTGGCACCAGAAAAAAATTTGAAGGGAAGTGCTACAATTGCTGA 792 0.4432 MGDLQVIGGIKKLNNQNYNTWSTCMMSYMQGQDLWEVVNGSEITQPKVEDANGILRKWKIKAGKAMFALKTTIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELFSVAQRDLTIAQYFHKVKTLCREISELDLEAPIGETRMKRIIIHGLRPEFRGFVAAIQGWQNQPSLVEFENLLAGQEALAKQMGGVSLKGEEEALYAHKGGWNSQQHTVRRTKKNEDKAKCSQGERSARVEGDSKNPGTRKKFEGKCYNC* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1223 263 MobiDBLite consensus disorder prediction 222 253 - -
Vvi16g1223 263 Pfam gag-polypeptide of LTR copia-type 58 182 - -
Vvi16g1223 263 PANTHER - 10 255 - -
Vvi16g1223 263 Pfam Domain of unknown function (DUF4219) 13 39 IPR025314 -
Vvi16g1223 263 MobiDBLite consensus disorder prediction 212 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1223 Vvi-Chr16 20921125 20921916 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1223 - - vvi:104882260 478.404