Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1219 ATGTCTGTTCAAAGGGAAGATTTTGAACACACGGGACCGAAACAGCTCACTGATGTTGACTGGGCAAATGATCATCACCTCCGGGCAGTTGCTGCGAGCCTGGTTCAGGGAGCATACAATTTAGAATTTGATCGCCAGGATTCCCAAGATCCCCAAGGCCGTTGGTGGCACTTCTTTCATTTTGAGTTAAAACATAAGCTCATAGATGATAAAGATTCATCCATCTACGGTGTCGTGTATGAAATCAAGTGCACATACCCTAACCATTTGCCAGAATCTACCCCAAAGTTTGTTATTGCCTTTCGTGGGACAATCATCAGCACCAAGAGCCGGGACATGAAGTTGAATATGAAGGTCTTCGCTGGTAAACTTCACAAGGACAAGCCCCGATTTAAACACGCGCTGGAAGCTGTCAAAGCAGTTGTTCAAGAAGCCTGGCCTGCAAATATTTGGTTAGTAGGGCATTCCCTGGGGGCATCCATTGCGATGCTGGTTGGAAAATCCATGGCCCAGGAGGGTAAGAATCTCAAAACTTTCCTTTTCAATCCACCTTTCTTGAGGTATTCCCTCTCAAAGAATATCAAAAATCCAACTTTAAAGGATGGAATCCTATCAACAAAGAATGTTATCAAAGCTGGGATCTCTTTTGTTGGGGGTGATCATTTGTGGCAGGAACTACATCACCAATTTAATAAATTGTCTCCTTGGATCCCCTACCTGTTTGTGAACCAAGACGATCCTCTTTGCTCAGGGTATATAGACCATTTTAGAAATAGGAAGATCAAAGATGAGATACGTTCAATAAGGAGTGCAATAAAAGCTGCATTTGTGAAGGATCCACAACTACCCATATATCTACTTCCTAAGGCATATCTAACTATTAGCAAGATCTCATCCTCACCTCTTCAAGCTCATGGACTAAAACAATGGTGGTACCAAATGTCTATAGGGCCAGGCTTTGCAAATTCATCAACAAAGGTATTGATAGATGATGCCATCCCCGTGGGTGAACCCTGA 1017 0.4317 MSVQREDFEHTGPKQLTDVDWANDHHLRAVAASLVQGAYNLEFDRQDSQDPQGRWWHFFHFELKHKLIDDKDSSIYGVVYEIKCTYPNHLPESTPKFVIAFRGTIISTKSRDMKLNMKVFAGKLHKDKPRFKHALEAVKAVVQEAWPANIWLVGHSLGASIAMLVGKSMAQEGKNLKTFLFNPPFLRYSLSKNIKNPTLKDGILSTKNVIKAGISFVGGDHLWQELHHQFNKLSPWIPYLFVNQDDPLCSGYIDHFRNRKIKDEIRSIRSAIKAAFVKDPQLPIYLLPKAYLTISKISSSPLQAHGLKQWWYQMSIGPGFANSSTKVLIDDAIPVGEP* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1219 338 Pfam Lipase (class 3) 132 178 IPR002921 GO:0006629
Vvi16g1219 338 SUPERFAMILY alpha/beta-Hydrolases 15 250 IPR029058 -
Vvi16g1219 338 Gene3D alpha/beta hydrolase 32 267 IPR029058 -
Vvi16g1219 338 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1219 Vvi-Chr16 20886749 20888112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1219 5 311 Acyl Lipid Metabolism Gene Families AT5G24220 38.671 2.16e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1219 - - vvi:100257345 700.279