Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1212 ATGGGCAAGGCCATCAGCGGCGAGTCAACGGTCGAGGTGGAGGAGCCATTGAGTCCGGCGGCACGTTTGTTCCAAACGCGACAATTTAATTGCTGCATTATAGCAATTATCGGGTGCAAAACCGTGTTTAACTCTCATGTCATCAAGGCGGGTTTGGAGCATACTTTGATTAAGCATCCTCGCTTTTCTAGCTTAATGGTTGCTGATAAAATGGGTGGTGAGATGAGATGGATTCGGACCAAAGTAAATGTAGAAGATCATATTATTATCCCAAACGTGGATCCAAACATGGGCTCACCGGACCAATTTATTGAGAGCTACATATCAAATATGACCAAAACCTACCTAGATGACTCGAAGCCCTTATGGGATATTCACCTCCTCAATGTCAAGACCTCTGAGGCTGAATCTACTGCAATTTTTCGTATCCATCACTCGATTGGCGATGGCATGTCAATCATGTCGCTTGTCCTTGCTTGTACTCGAAAAACATCTGACCTGAACGCATTGCCTACTATTCCAACAAAGAAAAGGCAGCGATCAAGCAACTCAGGCAGATTCATCAGGTTGGTGTCATACATTTGGTTTGTGTTGCAAGTGATATGTAACACATTGGTGGATGTTGTTATGTTCATTGCAACAAGTGCTTTTTTGAGGGACACTAGAACTCCACTCAAAGGTGCACCCGGGGTCGAGCTCAGCCCTAAGTGGTTCGTGCACAAGACGATCAGCTTGGACGATATAAAGCTAGTCAAGAATGCCATGGACATGACCATTAATGATGTAATCCTCGGAGTAACACAGGCAGGTCTTTCCCGATATCTCAACAGGCAATACGGTGAGGGTAATGCAGAAGAAGATGCAGCAAAGCAAAAGAGAAACAATCTTCCGAGAAAACTCCGATTCAGGGCAGCCCTTATCTTCAACATCAGGCCATCCATGGCCATTGAGGCTTTGGCTGATATGATGGAGAGGAAGTCCAAGACCAAATGGGGGAATTACATCGGTTACGCCCTCCTCCCCATCACCATTGCCCTACGCGATGACCCGTTGGACTATGTTCGCGAAGCTAAAGCCACGGTTGATCGAAAGAAACGCTCCCTTGAGGCCAAATGCACATTCCTAAGTGCCAAGTACATAGTAAACTTACTTGGAGCTAAGGTAGCTGCTGCCATATCATACAAAGTCTTCAGCAACACCACAATGTCCTTCTCAAACGTGGTTGGTCCGGTGGATGAAATTAGCTTTTACGGCCACCCCATGGCTTACCTCGCTCCCAGTGTTTACGGTCACCCTCATGCATTGACAGTCCATTTTCAGAGCTATATGAATATGATGACTATCAGTTTAGCAGTGGACCGAGACGCGGTTCCTGATCCTCACCAGCTCTGCAATGATCTAGCGGAATCGCTGAAGCTCATTAAGGCTGCTGTTATGAAGAAAGGACTCGCTCAGGAGAGTGTCCAGCGGTGA 1473 0.4664 MGKAISGESTVEVEEPLSPAARLFQTRQFNCCIIAIIGCKTVFNSHVIKAGLEHTLIKHPRFSSLMVADKMGGEMRWIRTKVNVEDHIIIPNVDPNMGSPDQFIESYISNMTKTYLDDSKPLWDIHLLNVKTSEAESTAIFRIHHSIGDGMSIMSLVLACTRKTSDLNALPTIPTKKRQRSSNSGRFIRLVSYIWFVLQVICNTLVDVVMFIATSAFLRDTRTPLKGAPGVELSPKWFVHKTISLDDIKLVKNAMDMTINDVILGVTQAGLSRYLNRQYGEGNAEEDAAKQKRNNLPRKLRFRAALIFNIRPSMAIEALADMMERKSKTKWGNYIGYALLPITIALRDDPLDYVREAKATVDRKKRSLEAKCTFLSAKYIVNLLGAKVAAAISYKVFSNTTMSFSNVVGPVDEISFYGHPMAYLAPSVYGHPHALTVHFQSYMNMMTISLAVDRDAVPDPHQLCNDLAESLKLIKAAVMKKGLAQESVQR* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1212 490 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 14 483 IPR045034 GO:0008374|GO:0045017
Vvi16g1212 490 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 53 263 IPR004255 GO:0004144|GO:0045017
Vvi16g1212 490 SUPERFAMILY CoA-dependent acyltransferases 11 157 - -
Vvi16g1212 490 FunFam O-acyltransferase (WSD1-like) family protein 5 175 - -
Vvi16g1212 490 Pfam WS/DGAT C-terminal domain 331 475 IPR009721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1212 Vvi-Chr16 20812676 20816151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1212 6 488 Acyl Lipid Metabolism Gene Families AT5G53390 54.713 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1212 - - vvi:100264132 972.23