Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1211 ATGGCGATAATTTCCGAATACCAGGAGGAGGAAAGGCCTCCGTCTACATCCACATTCAATGGAACTCTCGATCATTCGAATCCGCTGGAGTTTCTGAGGTCGGTGTTCCTGTTTGTTTCTCGGGAAACCGATTTCTTCAAGAGGGAGGCAGCGGAGAAGGAGGTGGCGATGCTGGCGAGGGGGATCAGGGAGGAGGAGAGGAAGAAGAAGGCGGAGGAGAGGGACCTGGAGGATAAGGGAAAGGCGGAGAAGCGGCTGAAGGAGACTAAGGTGGAGCCTGAGAAGAAGGCGGAGAAGGCGGAGAAGGCGAAAGAGAAGGTGGAGGATGCGAAGGCAGAGGAGAAGGAGGGAACGCAAGTTCCAAATAAAGGGAACGGCCTTGATCTGGAGAAGTATTCCTGGATGCAGACACTGCAAGAGGTTACTGTTACTGTGCCAGTCCCTCCTGGAACCAAATCAAGGTTTATAGTATGTGACATAAAGAAGAATCATTTGAAGGTTGGGCTTAAGGGCCACCCTCCAATAATTGATGGAGAACTCTCTAAGCCTATCAAGCCTGATGATTGCTTTTGGAGCTTAGAGGATCAGAAATCCGTCTCTATCCTGTTGACCAAGCATAACCAAATGGAGTGGTGGAAATCTTTGGTGAAAGGCGATCCTGAAATTGATACCCAGAAAGTTGAACCAGAGAACAGCAAGCTGTCTGACCTTGATCCAGAAACCCGCCAAACTGTGGAAAAGATGATGTTTGACCAGAGACAGAAAACTATGGGACTTCCAACAAGCGACGAGATGCAGAAACAGGAGATTCTAAAGAAGTTCATGGCTGAGCATCCGGAGATGGACTTTTCCAGGGCAAAGATTTCATAA 870 0.4885 MAIISEYQEEERPPSTSTFNGTLDHSNPLEFLRSVFLFVSRETDFFKREAAEKEVAMLARGIREEERKKKAEERDLEDKGKAEKRLKETKVEPEKKAEKAEKAKEKVEDAKAEEKEGTQVPNKGNGLDLEKYSWMQTLQEVTVTVPVPPGTKSRFIVCDIKKNHLKVGLKGHPPIIDGELSKPIKPDDCFWSLEDQKSVSILLTKHNQMEWWKSLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKTMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1211 289 Coils Coil 48 82 - -
Vvi16g1211 289 FunFam Nuclear migration protein nudC 123 250 - -
Vvi16g1211 289 Pfam CS domain 131 205 IPR007052 -
Vvi16g1211 289 SUPERFAMILY HSP20-like chaperones 116 231 IPR008978 -
Vvi16g1211 289 MobiDBLite consensus disorder prediction 58 126 - -
Vvi16g1211 289 PANTHER NUCLEAR MOVEMENT PROTEIN NUDC 20 285 IPR037898 -
Vvi16g1211 289 Gene3D - 123 250 IPR008978 -
Vvi16g1211 289 MobiDBLite consensus disorder prediction 58 118 - -
Vvi16g1211 289 ProSiteProfiles CS domain profile. 127 216 IPR007052 -
Vvi16g1211 289 CDD p23_NUDC_like 132 216 - -
Vvi16g1211 289 MobiDBLite consensus disorder prediction 1 25 - -
Vvi16g1211 289 Coils Coil 96 120 - -
Vvi16g1211 289 MobiDBLite consensus disorder prediction 10 25 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1211 K25866 - vvi:100260589 510.76