Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1205 ATGTGGAATCTTGGTCAATCGATTTTGGGAGGAAATGAAGAAGATCGAGAAGAGTACTTGGAAGACTCCGATGGCCTTTGCAATCTCTCTCCAGTGCAAAGAATGTACGGGTTTGCAGCTTGTTTGGTTGCTGGTTTCGCTTGTATGCTCCTGTCATTGATTGTTTTTGCTAAACCCATCAAATTTGCAGTATTGTTCACCTTTGGCAACTTGCTTGCTGTTGGAAGCACAGCCTTCCTAATTGGGCCTGTACAACAAATAAGAATGATGTTTGATCCTGTCCGTATCTATGCAACAGCTATTTACATCGGGTTTGTTGTTATAGCCCTCATTTGTGCTCTCTGGATCCATAATAAAATTTTAACAATCATTGCAATCATATGCGAGATCTGCGCCCTTATTTGGTACAGTTTAAGTTATATTCCTTTTGCTCGTGGCATGGTTTCTCGACTGACGGTCCATTTTTTTGACACGGAGATTTAG 483 0.412 MWNLGQSILGGNEEDREEYLEDSDGLCNLSPVQRMYGFAACLVAGFACMLLSLIVFAKPIKFAVLFTFGNLLAVGSTAFLIGPVQQIRMMFDPVRIYATAIYIGFVVIALICALWIHNKILTIIAIICEICALIWYSLSYIPFARGMVSRLTVHFFDTEI* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1205 160 PANTHER UNCHARACTERIZED 14 159 IPR011691 GO:0016020|GO:0016192
Vvi16g1205 160 Pfam Got1/Sft2-like family 35 142 IPR007305 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1205 Vvi-Chr16 20704072 20708561 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1205 - - vvi:100258855 314.694