Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1197 ATGATGTTGAATAAAGAAAAACTTGTGGGAGTAGGCCTCATAACCCTCCTCCATCTCTGCTTCTTTTCCGTCTGCGTTGCCGGCCAAAACCAGCCCTGCAGGCCTTCTTCTTGCGGGGATATGCTGAACATCAGCGACCCTTTCCGGTTAAAAGGCGACCCATCTGGCTGTGGGGATAGTCGGTATGAATTGGCTTGTGAAAACAATCGTACCATTCTCAATCTGTATCGTGGGAAATACTATGTCGAGGAGATTAACTACCAAAACTATAGTATCCGGGTGGTGGATCCTGGGCTGAAGAAGGGAAACTGTTTGTCCACTCCTCTCTATCACTTGACTCCTGAGAACTTCAGCTATGATCATCCGTACGCCTGGCCTTACGATTGGGGATTCAGAACGACAGTCTTGATGAGCTGCTCGAGGCCGATCAGCGACGACAAATTCATTCCCATCACTTCTTGCAATAGTACTAATGGCACAACCTCTTCCTCCTCACAGCCTTATCATTATGCGCTAAGTGGAGATGGAGAATCCCTGCAGGTGGGCGATCTCCCGGGCTCATGCACTATAGGAAAGTCAATATTTTCCAAGCTGGGGGCAGCTTCAGAGCCCGGAAACCGGTCAATGTCGAGCCTCCAAGATCAGCTTCTTCTGGGGATTGAGCTTTCGTTTCTGCAAATCCAGTGCATCAGAGAATGTAGGGTGAAAGGGCAAAGCTGCTACATGGATTACACTGTCAACTCAGTGAAATGCGATGACCCGAATTCATGCAAGGATTTGAGTGATGACTGCTACAAACCAATCTGGCTTAAGGGTTTGATCATCATCCTCCAGATCATCTTTGCTTCAATTTACACTCCGATCATTGCTGCAGGAATTTTAGGAAGAGCTTTACTTGGGGTGGTGCTTTCCTATGGAATCTACAAGCTTCGACAAAGGCACATATCAAAGCATGATACTACTAAAGAAATCCCATGA 978 0.4714 MMLNKEKLVGVGLITLLHLCFFSVCVAGQNQPCRPSSCGDMLNISDPFRLKGDPSGCGDSRYELACENNRTILNLYRGKYYVEEINYQNYSIRVVDPGLKKGNCLSTPLYHLTPENFSYDHPYAWPYDWGFRTTVLMSCSRPISDDKFIPITSCNSTNGTTSSSSQPYHYALSGDGESLQVGDLPGSCTIGKSIFSKLGAASEPGNRSMSSLQDQLLLGIELSFLQIQCIRECRVKGQSCYMDYTVNSVKCDDPNSCKDLSDDCYKPIWLKGLIIILQIIFASIYTPIIAAGILGRALLGVVLSYGIYKLRQRHISKHDTTKEIP* 326
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1197 325 PANTHER OS01G0690200 PROTEIN 14 261 - -
Vvi16g1197 325 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi16g1197 Vvi-Chr16 20625192 20626705 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1197 - - vri:117933792 647.121