Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1183 ATGGAGATGGTGGGGAGAAGAAAGAATGTGAATGCAAATGCAGCGCACTCGAGTCAAATATATTTTCCATCATGGATTTATGACAGATATGATCAAGAGGATAACATAGACTTGGGAGATGCCACTGAAGATGAAAAGAAGCTTGTTAGGAAAATGGTGATAGTTGCACTATGGTGTATACAGATGAAGCCCATAGACCGTCCTTCAATGAGCAAAGCTTTAGAGATGTTGGAAGGAGAGGTTGAGCTATTAGAAATGCCTCTGAAGCCTACTCTATACTCTGAGGAAATGTTAGTTGAGGATCATATGAGCAATCCAATAGAAGCACCAATTTCCTTGTGCAATTCCATGGGTACAATTACATTAGATGGAAAGTAG 378 0.3995 MEMVGRRKNVNANAAHSSQIYFPSWIYDRYDQEDNIDLGDATEDEKKLVRKMVIVALWCIQMKPIDRPSMSKALEMLEGEVELLEMPLKPTLYSEEMLVEDHMSNPIEAPISLCNSMGTITLDGK* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1183 125 SUPERFAMILY Protein kinase-like (PK-like) 27 107 IPR011009 -
Vvi16g1183 125 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Vvi16g1183 125 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 96 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1183 Vvi-Chr16 20509217 20509594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1183 1 105 Receptor kinase-like Gene Family AT5G38280 41.284 9.68e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1183 - - vvi:100853806 239.965