Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1177 ATGGTTATAGTTGCACTATGGTGTATACAGATGAAGCCGATAGACCGCCCTTTAATGAGCAAAGCCTTGGAGATGTTGGAAGGAAAGGTTGAATTGTTAGAAATGTCTCCTAAGTCTACTCTATACTATGAAGAAATGTCAATTGAGGATCATATCAACAATCCAATAGGAGCATCAATTTCCTGGCACAATTCCATGGATAAGTAG 207 0.3865 MVIVALWCIQMKPIDRPLMSKALEMLEGKVELLEMSPKSTLYYEEMSIEDHINNPIGASISWHNSMDK* 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1177 68 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 46 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1177 Vvi-Chr16 20451819 20452025 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1177 1 52 Receptor kinase-like Gene Family AT5G38280 50.000 2.04e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1177 - - vvi:100854525 108.227