Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1135 ATGGTAGGGAGAAGAAAGAATGTGAATGCAAATGCAAAGCACTCGAGTCAAATATATTTCCCATCATGGATTTACCTCAGATATGATCAAGGAGAGAATATAGACTTGGAAGATGCCATTGAAGATGAAAAGAGGTTTGTAAAGAAAATGGTTATAGTTGCATTATGGTGTATACAGATGAAGCCGATAGACCGCCCTTCAATGAGCAAAGCCTTGGAGATGTTGGAAGGAAAGGTTGAATTGTTAGAAATGTCGCCTAAGTCTACTCTATACTATGAAGAAATGTCAATTGAGGATCATATCAACAATCCAATAGGAGCATCAATTTCCTGGCACAATTCCATGGATAAGTAG 354 0.3785 MVGRRKNVNANAKHSSQIYFPSWIYLRYDQGENIDLEDAIEDEKRFVKKMVIVALWCIQMKPIDRPSMSKALEMLEGKVELLEMSPKSTLYYEEMSIEDHINNPIGASISWHNSMDK* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1135 117 Gene3D Transferase(Phosphotransferase) domain 1 1 95 - -
Vvi16g1135 117 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 94 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1135 Vvi-Chr16 19785467 19785820 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1135 1 103 Receptor kinase-like Gene Family AT5G38280 39.252 4.17e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1135 - - vvi:100854525 195.667