Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1131 ATGTTGTTATTGGAAATGGTAGGGAAAAGGAAGAATGTTAACACATTTGCAGAACATTCAAGTCAAATGTATTTCACATCATGGGTTTATAAATATGATCAAGAAGAGGACATGGAAATGGGAGATGCCACTGAGGAGGAAAAAAGGTATGTAAGGAAAATGGTGATAGTTGCACTATGGTGTATACAAATGAAGCCTGTAGATCGTCCTTCAATGAGCCAAGCATTGGAGATGCTTGAAGGAGAGGTTGAACTCTTGAACATGCCTCCTAAGCCAACTCTATGGTCTATTGATAATCATGAGCAATTCATGGTAGAGGCATCAACTTCATCATCCAATTCCATGGGTACAATTACCTTAAATGGAAGGTAG 372 0.3871 MLLLEMVGKRKNVNTFAEHSSQMYFTSWVYKYDQEEDMEMGDATEEEKRYVRKMVIVALWCIQMKPVDRPSMSQALEMLEGEVELLNMPPKPTLWSIDNHEQFMVEASTSSSNSMGTITLNGR* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1131 123 Gene3D Transferase(Phosphotransferase) domain 1 1 98 - -
Vvi16g1131 123 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 104 IPR045874 GO:0004672
Vvi16g1131 123 SUPERFAMILY Protein kinase-like (PK-like) 21 112 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1131 Vvi-Chr16 19772884 19773255 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1131 1 96 Receptor kinase-like Gene Family AT5G38280 44.554 3.63e-23 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1131 - - vvi:100853680 251.136