Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1120 ATGAACGGCAATGGATTAAGCAGTATGGAGTCGGAGTACATTCGGAGGCACCACAGGCACGAGCCTGCTGAGAATCAATGCAGTTCTGCTCTTGTTAAGCACATCAAAGCTCCTGTTCCTCTCGTTTGGTCTTTGGTGAGGAGATTCGATCAACCACAGAAGTACAAGCCATTCATCAGCAGGTGCGTTGTGCAGGGAAACCTTGAGATAGGGAGTCTTAGAGAAGTTGATGTCAAATCAGGACTTCCAGCCACTACCAGCACTGAAAGGTTGGAGCTTCTTGATGATGACGAGCATATCCTCAGCATGAGGATTATTGGTGGAGATCACAGACTCAGGAACTACTCTTCTATCATTTCCCTCCATCCAGAGATCATCGATGGAAGACCCGGGACTATGGTGATCGAGTCGTACGTGGTGGATGTGCCAGAGGGAAACACCAAGGACGAAACTTGCTACTTTGTTGAAGCCTTGATCAAGTGCAATCTCAAGTCACTTGCTGACGTCTCAGAGCGGCTTGCAGTGCAGGACCGTACTGAGCCCATTGATAGGATGTGA 558 0.4875 MNGNGLSSMESEYIRRHHRHEPAENQCSSALVKHIKAPVPLVWSLVRRFDQPQKYKPFISRCVVQGNLEIGSLREVDVKSGLPATTSTERLELLDDDEHILSMRIIGGDHRLRNYSSIISLHPEIIDGRPGTMVIESYVVDVPEGNTKDETCYFVEALIKCNLKSLADVSERLAVQDRTEPIDRM* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1120 185 PANTHER - 24 169 - -
Vvi16g1120 185 FunFam Abscisic acid receptor PYL9 1 180 - -
Vvi16g1120 185 SUPERFAMILY Bet v1-like 27 169 - -
Vvi16g1120 185 CDD PYR_PYL_RCAR_like 27 171 - -
Vvi16g1120 185 Gene3D - 3 180 IPR023393 -
Vvi16g1120 185 Pfam Polyketide cyclase / dehydrase and lipid transport 31 171 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1120 Vvi-Chr16 19637193 19640461 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1120 K14496 - vvi:100251890 374.4