Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1119 ATGGGTGGTCATGAGGGCTGGGCACAGCCCAATGGCTTTTCTCCAAATGGTCTATTGCCCAATGAAGCTGCCTCTGTGACTAGAGCACTTGACCAGGAGAGGTTGTCACTTGCTGAAGAGAGAACTAAACAGCTGATTGCCTGCATTCAGCCTAACCAACCCTCTGAGGAACGCAGAGAGGCTGTTGCGAGTTATGTGAAGAGTCTCATCATGAAATGCTTCTCTTGTAAGGTGTTCCCCTTTGGGTCTGTACCCCTCAAGACTTATCTACCAGATGGGGACATTGATCTAACAGCATTCAGTAAAAGCCCAAATTTGAAGGACACTTGGGCTAATGAGGTACGGGATATTCTAGAGAGAGAAGAAAAGAGTGGGGATGCTGAATTCCGTGTAAAAGAAGTTCAATACATCCAGGCAGAGGTCAAGATAATAAAGTGCCTTGTGGAAAATATCGTAGTGGACATATCCTTTAACCAGCTTGGTGGGTTATGTACTCTTTGCTTCCTTGAGGAGGTTGACCATTTGATAAGCCAAAAGCACCTGTTCAAGCGCAGCATAATATTGATTAAAGCTTGGTGTTACTATGAGAGCCGTATTTTGGGCGCTCATCATGGACTTATTTCGACTTACGCTCTGGAGACATTGGTTTTGTACATATTTCGTGTTTTCAATAATTCCTTTGCTGGGCCACTTGAGGTACTTTATCGTTTCCTGGAGTTCTTCAGTAAATTCGACTGGGAAAATTATTGTGTTAGTCTGTGGGGTCCAGTACCCATTAGTTCGCTTCCTGATGTGACAGCGGACCCTCCTCGAAAGGATAGCGGGGAATTATTACTCAGCAAATTATTTCTTGATGCTTGTAGCTCTGTATATGCTGTTTTGCCCGTTGGACAAGAAAATCCAGAGCAGCCCTTCATTTCCAAATATTTTAATGTCATTGATCCATTGCGTACAAACAATAATCTTGGACGCAGTGTCAGTAAAGGTAACTTTTTTAGGATTCGTAGTGCTTTTGCTTTTGGGGCTCAAAGACTAGCCCGATTACTTGATTGTCCAAAGGACAATGTCATTGCGGAAGTCAACCAGTTTTTCATGAACACATGGGAAAGACATGGGAAAGGCGATCGCCCTGATGCACCTAGTCCTGATCTTTATGGTTTGCAACAGGCTAGCTCGAATCATATTGAAGGATCTGACGGTTTCAGGAGTAATCCAAACAGAAAGAAAATGAAAGAGAATTCTATTAGTCACGAGTCTGAGGTTGAGGTGACTCGTGGTTCTCATGCTTCTCACAGTGTTTCTTCACAGCATGGCAACTATTCATCAAAACAAATTTCTAGGACTGCTGCTGTATATGCTGCTTCTCATACTCAAAACCAGAAGGCCTATGCCAACTTAACTAGCTCAATTACTGCCGATCAGAATCATCAGACTGCACAGAGTACAAGTTCCAATGAGAACATTCATACTGACAAGGGGAGAAGTTCTAGACCAGATTACTTGGGAAATGAAGTGCATGCCAGATATCAGTTTGCCAGGACGCATTCTAGTCCTGAGCTTACTGATGCATCTAGCGATGTTCCATCCAGAGGAAGGCGTAACAGGACATCAGAAACAGGAAAAGGCCAGACAGTTCCTGCAAGGTCTGATTATAGCAGGAGAAGAAACTTGGGTTCTGAAGTTCCAGACTACCATAGTGCTAGATCTTCAACTGAAAATTCACCATCTTCAAGGCATGGCTCATCCCATCGAAGTATTGATGCTGCTGTCAATTCAAATAGTGCTTCTAATAGCTATCATGGTGAATCTGGCTTAAGTACCGTAGGAGAAGACCATCCTTCTGTTGCTGAAACCATGCAGATGCACCAGGAAGAGCAAGATCGTGTAAACATGATGGCTTCCAGGGTTCATGGTTTTAGTGGACAGATACAGATGCCAGTAAATCTAGCTTCTGCTCATCTGCCGGTTCCAATATCGCCTTCTATTTTAGCTTCACTAGGACATGCTCACAGAAATGTGGCTGGTATGATTCCAACAAATATGGCTTCATTTGGGCCTCCTTGGGGCTCAAATATTCATTATTCTCAAGGTTTAACTTCTTTGCCAGTTTCTCAATATTTTCCTAGTGTAGGAATGACCTCAAATAAAGAAATGGTTGAACCGCTTGATGATAATTTGGGATCAACTGAAATTAATCAGGAGAATAATGATCATGGTTTCTGGTCTGAGCGTGACTCAGATTCCATGAGAGACTTTGATCCTGATAATGGAAATTCAGTGGGGTTTAACATTGGTACCTCATCTCGACCAAGCAGCTCTGACAATTATTTAATGAAAGCTCAAGGAGTAACAAAAGGAAACAGAGGGTTAATCAGGGAAAACTATGGCGACAATTCCCAATATCAAAACATCAAAGGAACTGATGTTTACTCTGCTGCCAGTTCACGATCTATACCTGCTTCCCAGGCCCCTCCTGCAAGAAGCAAGTTGTCTTCTGAAGGTTCCTGGGATGAATCACCTTCAAAGGTTTCAAGGTCAGCAAGGGACAGACGGGGAAGGAGAACTGCTCCTTCTGCAGAACCTTCTACCACGTATAGGTCAGGTAAGAATGGGCGGCAATATGAGGGTGAATTGGCTGAGCATGTTTCTTCTCTGCCAGATAATGACAGCAGAAACTGGATTCAATTGTCAATGGCAGGCACTGAGGGGGCAGAAAGTACAGTTTCTGGAACTGTTGATTCTTCACATGTTCGTACTAACTTAATTCCTGGTTATGAACCTGCACAGATGAGTGGATCAAGTTCAATGCTTCCCATTACTCCAATGCTTGTGGGTTCCGATTCAAGACAGAGAGGAGCTGATAACCATGGAATGGTACCTGTTGCATTTTATCCCATGGGGCCACCGATTCCTTTTGTAGCAATGCTTCCTTTTCCTGTATATAATTTCCCAAATGAGATGGGAAATTCCAGTTCATCAACAAGCCATTTAGATGGGGATGAGGAGTTTAGTAACTCTAATGCAAGCCAGTCTGATCAGAACTTGGATTCACCTGAGAACCTTGATCAGTCAGAGATCTTCAATAATTTGAATTCTATGAAAGGGCCTGCTTCTATGGAGCCTTCTGAAGAGCACGAGTCAGACATTCTGGACAGTGATTTTCCTCGTCATTTGCAGAATCTGCGAGAGGGGCAGCTTTGCCTGAATACCAGAAATCATGAGCCTTGGCTTTATCCTTCTGTTATGCCACCCATGTATTTTCAGGGTCCATGGGACAGTCCTGGAAGACCTCTATCTACAAACATGAACCTCTTTGCACAGCTTATGGGTTATGGTCCTCGCCTCATTCCTGTTTCACCTCTCCAGCCTGGGTCTAATAGGCCTACTGGTGTTTATCAACATTATGGTGATGAAGTTCCTAGATATCGTGGTGGGACTGGGACTTACTTGCCAAATCCTAAGATTTCTTTTAGGGACCGGCAATCTTCAAATACCAGAAACCACAGGGGGCATTATGGTTACGATAGGAAGGATCACCATGGTGACAGGGACGGAAACTGGAACATCAACTCTAAGCCACGATTTTCTGGTCGTGCTCAAGGTCGGAACCAAGTTGATAAGCCAAACTCAAGGATTGATCGGTCAACCTCAAGTAACAGCCAATCTGATAGATCATGGGATACATTCAAGCATGAACCTTTCCCCTCATATCACTCCCAAAACGGTCCTCTTAGCTCCTCAAACTCCACTAACCGTGGTTCTGCCAATATGGCATATGGCATGTATCCAATGCCAGTCATGAATCCAAATGGTGTTTCTCCATCTGGAACTGGTGTGCCCCCTGTAGTTATGCTGTATCCATATGACCAGAACATGGGCTATGCGTCTCCAACTGATCAGCTTGAGTTTGGGTCTCTTGGGCCTGTTCATTTCTCAGGTATAAATGAAGTGTCTCAACTCAGTGAAGTTTCATCAAGGGGGGTCAATGATTTGCAAAATTTCCAAGGAGATTCTGCACTTTCTTCACCAGATCAGCCCTCTTCGCCCAAGATTCAAAGGGGGACTTAA 4068 0.4393 MGGHEGWAQPNGFSPNGLLPNEAASVTRALDQERLSLAEERTKQLIACIQPNQPSEERREAVASYVKSLIMKCFSCKVFPFGSVPLKTYLPDGDIDLTAFSKSPNLKDTWANEVRDILEREEKSGDAEFRVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDHLISQKHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFRVFNNSFAGPLEVLYRFLEFFSKFDWENYCVSLWGPVPISSLPDVTADPPRKDSGELLLSKLFLDACSSVYAVLPVGQENPEQPFISKYFNVIDPLRTNNNLGRSVSKGNFFRIRSAFAFGAQRLARLLDCPKDNVIAEVNQFFMNTWERHGKGDRPDAPSPDLYGLQQASSNHIEGSDGFRSNPNRKKMKENSISHESEVEVTRGSHASHSVSSQHGNYSSKQISRTAAVYAASHTQNQKAYANLTSSITADQNHQTAQSTSSNENIHTDKGRSSRPDYLGNEVHARYQFARTHSSPELTDASSDVPSRGRRNRTSETGKGQTVPARSDYSRRRNLGSEVPDYHSARSSTENSPSSRHGSSHRSIDAAVNSNSASNSYHGESGLSTVGEDHPSVAETMQMHQEEQDRVNMMASRVHGFSGQIQMPVNLASAHLPVPISPSILASLGHAHRNVAGMIPTNMASFGPPWGSNIHYSQGLTSLPVSQYFPSVGMTSNKEMVEPLDDNLGSTEINQENNDHGFWSERDSDSMRDFDPDNGNSVGFNIGTSSRPSSSDNYLMKAQGVTKGNRGLIRENYGDNSQYQNIKGTDVYSAASSRSIPASQAPPARSKLSSEGSWDESPSKVSRSARDRRGRRTAPSAEPSTTYRSGKNGRQYEGELAEHVSSLPDNDSRNWIQLSMAGTEGAESTVSGTVDSSHVRTNLIPGYEPAQMSGSSSMLPITPMLVGSDSRQRGADNHGMVPVAFYPMGPPIPFVAMLPFPVYNFPNEMGNSSSSTSHLDGDEEFSNSNASQSDQNLDSPENLDQSEIFNNLNSMKGPASMEPSEEHESDILDSDFPRHLQNLREGQLCLNTRNHEPWLYPSVMPPMYFQGPWDSPGRPLSTNMNLFAQLMGYGPRLIPVSPLQPGSNRPTGVYQHYGDEVPRYRGGTGTYLPNPKISFRDRQSSNTRNHRGHYGYDRKDHHGDRDGNWNINSKPRFSGRAQGRNQVDKPNSRIDRSTSSNSQSDRSWDTFKHEPFPSYHSQNGPLSSSNSTNRGSANMAYGMYPMPVMNPNGVSPSGTGVPPVVMLYPYDQNMGYASPTDQLEFGSLGPVHFSGINEVSQLSEVSSRGVNDLQNFQGDSALSSPDQPSSPKIQRGT* 1356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 729 775 - -
Vvi16g1119 1355 FunFam PAP/OAS1 substrate-binding domain superfamily 161 357 - -
Vvi16g1119 1355 Gene3D Beta Polymerase, domain 2 51 160 IPR043519 -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 1234 1252 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 842 856 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 1029 1048 - -
Vvi16g1119 1355 CDD NT_PAP_TUTase 58 165 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 473 585 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 1161 1187 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 737 752 - -
Vvi16g1119 1355 Gene3D - 161 355 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 426 442 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 1142 1252 - -
Vvi16g1119 1355 SUPERFAMILY PAP/OAS1 substrate-binding domain 181 352 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 815 872 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 1189 1224 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 401 425 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 988 1021 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 393 442 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 473 489 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 563 585 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 759 775 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 815 841 - -
Vvi16g1119 1355 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 20 1350 - -
Vvi16g1119 1355 MobiDBLite consensus disorder prediction 1326 1355 - -
Vvi16g1119 1355 FunFam PAP/OAS1 substrate-binding domain superfamily 51 160 - -
Vvi16g1119 1355 SUPERFAMILY Nucleotidyltransferase 20 200 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1119 Vvi-Chr16 19589104 19599879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1119 - - vvi:100248390 2717.95