Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1112 ATGGGTGATAGGTTGCATTTGGCAATTGGAGTAATGGGGAATGCAGCTTCTCTGTTACTTTACACTGCACCCATATTAACTTTTGCAAGGGTTATGAGGAAGAAAAGCACTGAGGAGTTCTCATGCATTCCTTACATCATTGCACTGTTGAACTGTCTCCTATATACTTGGTATGGCCTACCTGTTGTAAGCTACAGGTGGGAAAATTTCCCAGTGGTCACCATCAATGGCTTAGGAATTCTTCTCGAATTCTCCTTCATTCTTATATACTTTTGGTTCACTTCACCTAGGGGAAAGATCAAGGTAGTTGGGACAGTAGTACCTGTTGTCACAGTGTTCTGCATCACCGCTATTATCTCATCTTTTGTGCTCCATGATCACCATCACCGCAAGATGTTTGTTGGCAGCGTTGGACTAGTTGCCTCTGTAGCAATGTATGGTTCTCCCCTGGTGGTAGTGAGGCAGGTGATACTCACAAAGAGTGTTGAATTCATGCCATTCTACTTATCTTTTTTCTCATTCCTCACTAGTTTTCTTTGGATGGCTTATGGACTACTGGGTCATGATCTCCTTCTAGCGTCTCCTAATCTGGTGGGTAGCCCCCTTGGCATCCTCCAGCTTGTGCTCTACTGCAAGTACAGGAAAAGGGGAATAATGGAAGAACCAAACAAATGGGATTTGGAAGGAAATGATGAGAAATCCAAACAGTTGCAGCCTGTGATAAACAATGACAGTAATGGCAAGATTTGA 750 0.4333 MGDRLHLAIGVMGNAASLLLYTAPILTFARVMRKKSTEEFSCIPYIIALLNCLLYTWYGLPVVSYRWENFPVVTINGLGILLEFSFILIYFWFTSPRGKIKVVGTVVPVVTVFCITAIISSFVLHDHHHRKMFVGSVGLVASVAMYGSPLVVVRQVILTKSVEFMPFYLSFFSFLTSFLWMAYGLLGHDLLLASPNLVGSPLGILQLVLYCKYRKRGIMEEPNKWDLEGNDEKSKQLQPVINNDSNGKI* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1112 249 Gene3D - 10 105 - -
Vvi16g1112 249 Gene3D - 133 224 - -
Vvi16g1112 249 FunFam Bidirectional sugar transporter SWEET 7 99 - -
Vvi16g1112 249 PANTHER RAG1-ACTIVATING PROTEIN 1 16 227 IPR047664 -
Vvi16g1112 249 FunFam Bidirectional sugar transporter SWEET 130 223 - -
Vvi16g1112 249 MobiDBLite consensus disorder prediction 235 249 - -
Vvi16g1112 249 MobiDBLite consensus disorder prediction 229 249 - -
Vvi16g1112 249 Pfam Sugar efflux transporter for intercellular exchange 9 95 IPR004316 GO:0016020
Vvi16g1112 249 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1112 Vvi-Chr16 19513014 19514617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1112 1 248 Miscellaneous Gene Families AT5G53190 62.151 4.39e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1112 K15382 - vvi:100246651 475.707