Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1105 ATGCAGAGTCGTGGATCGAATCAACGGTTATCGGCGATGCTTTCCGGCTCACGACCGTCAACTCTTTTGTTCGCTATGTTCTCTATTGTGGCTGCAATTTACGTTGCCGGCAGGCTATGGCAGGATGCGCAGAACAGAATTTATTTAATTAAAGAACTTGACAGAATAACTGGTCAGGGCAAATCAGCTATATCAGTGGCTGACTCATTGAAGATCATAGCCTGCAAGGAACAGCAGAAGAAATTGGCAGCCCTTGAGATGGAGTTGGCTGCAGCTAGACATGAGGGTTTCGTTACAAAGCCCTCTTCAAGAGCTAGTGGGACTGGCTTGAAGAAAAGGCCTTTGGTAGTGATAGGAATTCATACCTCATTTGGCCAGAAGAGAAACAGAGATGCAATCCGTAAAGTATGGATGTTAACTGGTGCAGCTTTAAAAAAGATGGAGGATGAAAAGGGTATAGTTGTTCGATTCATCATTGGAAGAAGTGCAAATCAGGGGGACAGTCTGGACAGGGCCATTATCAATGAAAATAGGCAGACCAATGATTTCATTATTCTTAATGACCATGTGGAGGCACCTGAGGAGCTTCCTAAGAAGACCAAGTTGTTCTTTGCTCATGCTGCTGATAACTGGGATGCTGAATTCTATGCGAAAGTAAATGATGATGTTTATGTGAATATTGATGCCCTGGTGACCATGCTTGAAGCTCATTTGCAGGTGTCTCGAACGTATATCGGTTGTATGAAATCAGGCGAAGTTTTTTCTGATGTGGGCCATAAATGGTATGAATCAGATTGGTGGAAGTTCGGTGATGGGAAATCGTACTTCCGCTATGCATCAGGTGAAATGTATGTCATATCCCGAGGATTGGCTAAATTCATTTCAATAAATAGATCTCTTATAAGGACTTATGCCCATGATGATGCCAGTGTCGGATCTTGGTTTATTGGCCTCAATGTTGAATATGTGCATGAACCAAAGTTTTGCTGCTCATCTTGGACATCAGGGGCCATATGTTCCGGCGTTTGA 1029 0.4334 MQSRGSNQRLSAMLSGSRPSTLLFAMFSIVAAIYVAGRLWQDAQNRIYLIKELDRITGQGKSAISVADSLKIIACKEQQKKLAALEMELAAARHEGFVTKPSSRASGTGLKKRPLVVIGIHTSFGQKRNRDAIRKVWMLTGAALKKMEDEKGIVVRFIIGRSANQGDSLDRAIINENRQTNDFIILNDHVEAPEELPKKTKLFFAHAADNWDAEFYAKVNDDVYVNIDALVTMLEAHLQVSRTYIGCMKSGEVFSDVGHKWYESDWWKFGDGKSYFRYASGEMYVISRGLAKFISINRSLIRTYAHDDASVGSWFIGLNVEYVHEPKFCCSSWTSGAICSGV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1105 342 Coils Coil 75 95 - -
Vvi16g1105 342 Pfam Galactosyltransferase 129 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vvi16g1105 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 80 321 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vvi16g1105 342 FunFam Hexosyltransferase 105 334 - -
Vvi16g1105 342 Pfam Domain of unknown function (DUF4094) 17 94 IPR025298 -
Vvi16g1105 342 Gene3D - 110 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1105 Vvi-Chr16 19396056 19401522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1105 21 342 Glycosyltransferase AT5G53340 67.702 1.19e-168 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1105 K20854 - vvi:100255287 677.167