Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1104 ATGAGTTACGATTACAGGAACAGAGCAAATCAGCCGTACGATTCTCAGATCCCAATGTACAAAACCACCACATCTTCATCTTCTTCCGCACCAGGCCATCAGTTGTACGGAGCTCCTATGTATCCTAGGGTTAGTCAACCCTCGTTCGGCGCCGTTCCTCCCCCCGGCCGTGCTTCCTCTTATCAACAGACCTCTGCACCTTCCTCGTCTCCTGGATTGGGCATTAGAGTTGTGATCAAACCAGAATTTCGGATCTCTCCTCCGCCTCAATTATCACCACAAGTGGGAGAGATTCCCCGGAGCACTTTCCAGTTTGACTTTGATCTCGAGAAAAAGATATTAGCTGAAGCAGAGAAGGACAGCCAAAATTGGAGCAGGCTTGGGTTGGAGAATCTTCCGTCAAAAGCTTTAGAATCAACTCCATCAATGGGTTCCACTGCAGATCCTGTGGTGAGCAAATACATTGCATCTGGGCTTAGTCGAGAAGCTGTTCCTCTTGCTGTTGCCAATTATGGAGACAATGAAACCAAGGTTCGGGAATTTACCAATGGCTACACCCTCCTGCGAGAAATGGGATTCTCATCAAGCAATGTTGCTGAAGCTTTAGTCATGTATGACAACGACACCGACAAGGCTCTTGCGCATTTCCTTAACAGCTCATCCTGA 666 0.479 MSYDYRNRANQPYDSQIPMYKTTTSSSSSAPGHQLYGAPMYPRVSQPSFGAVPPPGRASSYQQTSAPSSSPGLGIRVVIKPEFRISPPPQLSPQVGEIPRSTFQFDFDLEKKILAEAEKDSQNWSRLGLENLPSKALESTPSMGSTADPVVSKYIASGLSREAVPLAVANYGDNETKVREFTNGYTLLREMGFSSSNVAEALVMYDNDTDKALAHFLNSSS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1104 221 PANTHER LD44032P 58 220 IPR038870 GO:0000813|GO:0043130|GO:0043162
Vvi16g1104 221 Gene3D UBAP1 SOUBA domain 143 221 IPR042575 -
Vvi16g1104 221 MobiDBLite consensus disorder prediction 1 33 - -
Vvi16g1104 221 MobiDBLite consensus disorder prediction 57 71 - -
Vvi16g1104 221 SUPERFAMILY UBA-like 182 219 IPR009060 GO:0005515
Vvi16g1104 221 MobiDBLite consensus disorder prediction 1 73 - -
Vvi16g1104 221 FunFam Ubiquitin-associated/translation elongation factor EF1B protein 143 220 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1104 - - vvi:100260370 439.113