Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1094 ATGGAGAAGCAATATGGAAGGAAACCCAAAAGTACAGGCCTAATAGATCACGTCTTCTCTTGGTCTCTCAATGATGTACAAAACCAAGCTCTTTACAAAGACAAGGTGAGTCCAATCCCAGATAAATTCTCTTCAAGGCGGCATTACATGGGATCATTCATTGTTTCGCTCATAGAGGAAACCCGTGCTGATTTGTCTTCAAGCATTAGAACAGCTTGTGAAGCATCTGAGTCTGAGTCTGAGTCCAGTACATGGGAGCCAACTTCAGTGGATACAGCTGCTAGAGAACTGATGTCTATTGAAAAATCCTCACAATTCAAGCTTCCCAGATACTTTCTATATGATGTTTCACTGAAGAGCGTAGAAGGTAATGGAAATAATGCGGAAGTGTATGAGCCTCAGGCAGGAGACATCATTGCATTAACAGATAAAATACCATACTACATCGAGTCAGAAAGTTGTTACAATATCGCTTTAGTTACAGGATCTTATGGAAAAACCTCTGATAAGCTCCAAATACAGTCGCCAAAGCCCATGATGCATGAACAAATCATGTCGGATAATAAGAAGAGACGAACTATTTATGCGGTATATTTGATAAATATTACTACAAATAATTGTATATGGGAGGCATTGCACCGGAGTCCTCATGGGGGAAACATCAGAATTATCGACAAAGTTCTGCAAACTGACTCCTCAGCTGGGAGAGGATGTGCTTTGTGTTCCTCTGGTTCAGAGGCCTTCAAATCTGTAACAGATTTGGAGGACAGGATTCGATCTTTCGGTCTAAATCTTTCCCAAGAAGAAGCTGTTTTAAGCTGTATTTCTGCAGCCATGTGTCATCATGAGAATAGTGTAAAACTGATAAAGGGTCCTCCTGGAACGGGGAAGACGAAGACCGTCGCCTCGTTATTATTTGCTGTCTTGAAGATGAAATGCAGGACTCTTGCTTGTGCCCCAACTAATACTGCAGTTTTACTAGCGACGGAGAGGCTGTTGAGCTTTGTTAAAGGGTCTCTTGAGAATGGTACTTATGGGATGGGAGATATTGTTCTTTTTGGGAGTACTAGGGGAATGCAGATTGATGATTGTGACGATGAACTTCACGATATCTTTCTTGATTCCCGTGCTAATATCCTAGCCCGGTGTTTCGCTCAAGGTTCCGGGTGGAAACACAGCTTAGAATCCATGATAACTTTGCTGCAAAACCTTGAAGGAAACTACAATTTATGCTTGGGGAACAGAGAAGATGAAGGCAATGAGGAACAGGGGAAACAGGGGAAGCTGGGGAAGGGAATTTTCATAGATGAGAAGGAAGAAATCGATAAAAAAAATTTTCAAAGCTTGAAATTCAGTGGTGGAGAATGTGATGATTTCTTTATATCCCAGGATTTTGTGGAGAGGTTTGATTTGGTTCATGGGCAGCTGAAGGTTTACACTGTAAATTTGTACACCCACTTGCCAACCTCAATGATTCCACTAGATGTGATGAAAAATATGGTCAGAGCTCTGAATTTGCTGAAAAATCTATCAGATTTGTTGCATTCTATAGAGGAAGACCTCGACAAATTTGAAGATAAAGGAAAAAGGATCCGTCGGCTTCCTGACTTGCAGAGGAGAACAGAAGTCTGCCTTCAAACACTCAGAAGCCTTGGCAAAATGTTCTCTGTTCCAACTCTTGCTAATGAATACAAAATCAAAAGTTTATGTTTGAAAAACGCCGTCTTGATTTTCTGCACTGTTTCGAGCTCATCCAAATTACTGCACATCAAAGATATGAAAGGCATTGAATTGCTGGTTATTGATGAAGCTGCTCAGCTGAAAGAATGTGAGTCCACCATTCCTTTACAAATTTCTGGAATCCGCCATGCAGTTCTAGTAGGAGACGAGATGCAACTACCGGCATTGGTTAAAAGCAAGGAGTTGGAGAATACCAAATTCGAAAGAAGTTTGTTCGAGAGATTAGTATCGTTAAGACACTACAAGCACCTTCTTGACGTCCAATACAGAATGCATCCATCCATAAGCCTTTTTCCCAATAACGAGTTCTATGAAGGTGATATCATCAATGCTCCAAAAGTGAAAGAAGCTATCTACAGTAGGCGCTTCCTCCATGGAAACATGTATGGGCCATTCTCTTTTATAAATGTAGCTTCCACAGTGCCAGAACTTGAGGAATTCAATGTAAGACATAGCTCAAAAAACATGGTGGAGGTAGCTGTGGTCTCTCAGATCATTGCAAGCCTCTTTGAAGAAACCAAAGCCAGAAAAGAGAAAGTTAGTGTTGGTATCATATCACCATACAAGGCTCAAGTTCATGAAATTCAGAAAAAACTTGGGAAGGCATATAGCACAGATGCAGAGAGTCAATTCTCTATCAAAGTTTCTACTGTTGATGGATTTCAAGGTGATGAAGAGGATGTGATTATTATCTCCACTGTCAGATGTAACAGCGGAGGCCACATCGGTTTTGTCAAAAATTATAGAAGAGCAAATGTGTCTCTTACCCGAGCAAGGCATTGCCTTTGGATAACAGGAAATGCCAAGACTTTAGAGGACAGTCACTCCGTTTGGGAAAAAGTAGTCCAGCATGCTAAAGGGCAGAGGTGTTTCTATAACGCTTATGAGGATACCAACCTGGCCAAGGCTCTCATTGTCTGCTTCCTTGAGCGTTACCATCTTGATGGTGTACACTATATGGCTTCTCAACTCTTCAGGAACACAAGATGGAAGGTCTTTTTTGATGACAAGTTTTGGGAATCCATGGCCAAGATTATGAACACCGCGGTTCACAAGGAAGTACTTTCTCTGCTAGAGAAGCTCTCAAGTGGTTGGCGTCCCAAAGTCAGAAACCCATATGCCATCAATGGGACTCATTTGATGCAGTACATTATCAAAAGGCAGTTCCATCTCCTTTGGGCAGTAGACATTGTGGAGGAGAATTCATGTTACATCCAGGTTTTGAAGGTTTATAACATTGTGCCATCTCATGAGACAACAGGAGTAACACGGGACCTTTGTGCTTCATTTGAGAAATTCACCATTGACCATATCAACCGCTGCAAATATACAAGTGGACAAGGGGAAGCTCCTATGATATGGCAGATGCCTTCTAAGGGTCTCTATCGAGGATTTCATTAG 3141 0.4155 MEKQYGRKPKSTGLIDHVFSWSLNDVQNQALYKDKVSPIPDKFSSRRHYMGSFIVSLIEETRADLSSSIRTACEASESESESSTWEPTSVDTAARELMSIEKSSQFKLPRYFLYDVSLKSVEGNGNNAEVYEPQAGDIIALTDKIPYYIESESCYNIALVTGSYGKTSDKLQIQSPKPMMHEQIMSDNKKRRTIYAVYLINITTNNCIWEALHRSPHGGNIRIIDKVLQTDSSAGRGCALCSSGSEAFKSVTDLEDRIRSFGLNLSQEEAVLSCISAAMCHHENSVKLIKGPPGTGKTKTVASLLFAVLKMKCRTLACAPTNTAVLLATERLLSFVKGSLENGTYGMGDIVLFGSTRGMQIDDCDDELHDIFLDSRANILARCFAQGSGWKHSLESMITLLQNLEGNYNLCLGNREDEGNEEQGKQGKLGKGIFIDEKEEIDKKNFQSLKFSGGECDDFFISQDFVERFDLVHGQLKVYTVNLYTHLPTSMIPLDVMKNMVRALNLLKNLSDLLHSIEEDLDKFEDKGKRIRRLPDLQRRTEVCLQTLRSLGKMFSVPTLANEYKIKSLCLKNAVLIFCTVSSSSKLLHIKDMKGIELLVIDEAAQLKECESTIPLQISGIRHAVLVGDEMQLPALVKSKELENTKFERSLFERLVSLRHYKHLLDVQYRMHPSISLFPNNEFYEGDIINAPKVKEAIYSRRFLHGNMYGPFSFINVASTVPELEEFNVRHSSKNMVEVAVVSQIIASLFEETKARKEKVSVGIISPYKAQVHEIQKKLGKAYSTDAESQFSIKVSTVDGFQGDEEDVIIISTVRCNSGGHIGFVKNYRRANVSLTRARHCLWITGNAKTLEDSHSVWEKVVQHAKGQRCFYNAYEDTNLAKALIVCFLERYHLDGVHYMASQLFRNTRWKVFFDDKFWESMAKIMNTAVHKEVLSLLEKLSSGWRPKVRNPYAINGTHLMQYIIKRQFHLLWAVDIVEENSCYIQVLKVYNIVPSHETTGVTRDLCASFEKFTIDHINRCKYTSGQGEAPMIWQMPSKGLYRGFH* 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1094 1046 FunFam P-loop containing nucleoside triphosphate hydrolase 669 881 - -
Vvi16g1094 1046 Pfam AAA domain 648 849 IPR041679 -
Vvi16g1094 1046 Coils Coil 500 527 - -
Vvi16g1094 1046 Gene3D - 669 886 IPR027417 -
Vvi16g1094 1046 Pfam Domain of unknown function (DUF6469) 113 215 IPR045529 -
Vvi16g1094 1046 CDD SF1_C_Upf1 671 866 IPR047187 -
Vvi16g1094 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 261 855 IPR027417 -
Vvi16g1094 1046 PANTHER DNA2/NAM7 HELICASE FAMILY 23 951 IPR045055 -
Vvi16g1094 1046 Gene3D - 215 668 IPR027417 -
Vvi16g1094 1046 Pfam AAA domain 263 640 IPR041677 GO:0004386
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1094 Vvi-Chr16 19263541 19269664 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1094 - K10706 vvi:100257019 2045.78