Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1093 ATGAGGAGGGTGAATGTGAGGAGAGTAACAGGCACTGGAGGAAACTTGACAGATGTGGTGTTCTCTTGGTCTCTGGATAATGTCCTCGATGAAAACTTTTACAAGAGACAGGTGGGAAAGATACCAATGGAATTCTTGTCGAAGCCTGTTTACATGACATCGTTCATTCCCGCACTTCTTGAGGAAATACGTGCTGATTTGTTGTCAAGCATGAAAACAGTATTTGAGGACCATGCAAGTGATCCACCTGTGCGTGAAGTACAGTTTGTTGAAGAATCTACACGATATGGTCCTCCAAAAAACTTGTATAATATTTCACTGAAAGGTGAGAGAGTTGCAGAAAATGATGCTGTAACATATAAGCCTGAGAACGGAGACATTATCGCACTGACAGATACGAGACCAAATAGTATTGATGATTCAAAGAGGTCTGAAAGATCTTATCTTATTGCTTTCATTCAAGGATCAAGAAAAGACTCAGATGAATTTCAAATTGTGTCATCGAAGCCCATTGAATTTGAACAAAACATGCAGGAGGATGGGAAGAGAAATACCCTTTATGCTGTTTTTCTAATAAATTTGACAACAAATATTTGCATATGGAATTCATTGACCCAGGGTCTTCAAGGGGGCAGCATGGCAATCATTGAAAAAGTGCTGCGACCTAATTCCTATGCTGGGGGTAGATGTAAAATCTGCTCCTCTGGTTCTGTATCAGATTCAGTGGCCAGAATTAATTCTTTTAAGCTAAACAGGTCCCAAAAAGCAGCTGTTTTAAGCTGTCTTGCTACAGCAAACTGTCATCATCAGAACAGTGTGGAACTAATAAAAGGCCCTCCTGGGACAGGGAAAACAAATACGGTTGGTTCATTATTGTGTGCACTCTTAGGGATGAAATGCAGAACGCTTGCTTGTGCCCCAACTAATATTGCTGTATTAGAAGTTGCAGCACGGGTTTTGAGCTTAGTTGAAGAGTCACTTGAATATGATGCTTATGGACTGGGAGATATTGTTCTTTTCGGGAGTAGTGAGGGTATGAATATTGATGATGATAGCGATCTTCATGATGTCTTTCTTGACACCCGTGCTAGGATTCTAGTACGGTGTTTTGCTCGACATTCTGGGTGGAAACACTGTTTAGAGTCTATGATAAATTTGCTTGAAGGAACTAAGGAAGACCGTATTTTGTACATGGAGGACAGAACAAATAAAGACAATAACAGACATAAGGAGAAGAAGCATGAGAAGGGAATTCTTGAAGATGAGAAACTAGAAATCTGTAAGGAAAGAGAGGAGGTTCAATACTTCGAAGATCCGAAGAGCAAGAAAATTTGGAAGATGGTTGGTGGTCAAACCTCAAAAGGAAAGAAAAACAAGGAGAGACAGCCCAAGGTACCTTCTCCAGAAACCGACAAATTACTGTATGGGGCGAAAGAGGACAAGGGTGAACTTACTCAAAACAAAAATAACAGAGTGGCTACTGGTGGACACCATGATTTTCTAATGTCTGAGAAGTTTGTTGAAAGGTTTGATTTCGTAGGAGAGCAGCTGAAGCTTTTCACTGAAGCTCTGTATACCCATTTACCAACTTCCTTCATTTCATTGGAAGTGGTAAAAGACATGGTTAGAGCTCTTGATTTGCTGGAACGCCTGAAGGAAGTCCTCCATGAATGTGAAGATGTGGGAAAATGTGCTGATCTCCTTCCTGAATTATATAGCACCAGAGAAGAGTGCCTTCAAAGTCTCAAATGCCTTTGTAAAAAAATCACTCTTCCAAATTTTTATACAGATGATAAAATCAAAAAGTTTTGTTTGGAAAAGGCTTGTTTGCTTTTCTGCACTGCTTCAAGCTCAGTTAAATTGAAGATGAAGGGAATGACACCAGTTGAATTGTTGGTTATAGATGAAGCCGCTCAGCTAAAGGAATGTGAATCAACCATTCCTTTACAAATTTCTGGTCTGCGCCACGCTATTCTAGTGGGGGATGAGATGCAACTACCAGCATTAGTCAAGAGCAAGATTTCAGAGAAGGCGGGATTTGGAAGAAGTTTGTTTGAGAGGCTGGTATTGTTAAAGCATGAGTACCACCTTCTCAATATCCAGTATCGGATGCATCCGTCAATAAGTTTTTTTCCAAATAAGGAGTTCTACGAGAATCAGATTTCTGATGCTCCAAATGTTAAAGATAGAAGCTACGAGAAGCAGTTTCTTCAAGGAAGCATGTATGGGCCATACTCTTTTGTGAATGTAGCATATGGAAAAGAGGAATTTGAAAACCATAGCTCAAGAAACATGGTGGAGGTTGCTGTTGTATCTGAGGTAGTTACAAGTCTTTTTAAAGAATCTGTCTCCAAGAAACAGAAGGTTAGTGTTGGTGTGATATCACCCTACAAAGCTCAAGTTATAGCAATTCAGGAAAAACTTGGAAAGATATACAATACAGATGAAGAACGTGACTTCTCTGTCAAAGTTTGCACGGTTGATGGGTTTCAAGGCGGTGAAGAGGATGTTATTATTATCTCAACTGTCAGAGGTAATGAGAAGGGCTTAGTGGGTTTCCTTTCCAAACGTCAAAGAGCAAATGTGTCTCTTACACGAGCAAGGCATTGCCTCTGGATATTCGGGGAAAGTGAAACTCTAGTAGCAAGTGGCACTGTTTGGAAGAGAGTTGTGGAGGATGCCAAAGAGCGAGGGTGTTTCTATAATGCTAGTGCGGAAAAGAACCTGGCTCAGGCTATGGCTATATCCCTGGTTGAGCAAGGCCAACTTGATGATTTACATGATATAGCTTCTCTACTATTCGGGAAGGCAAGATGGAAAGTTTTCTTCAGTGACGAGTTCTGGGAATCCATGGTCAGCATCTTCAACACCGAGGTTCACAAGGAAGTGGTTTCTCTGTTAGAGAAGCTCTCAAGGGGTTGGCGTCTCAAAGACAGAAACTTCTATACCATACATGGGAATCTTTTGGTCCAGTACAATGTAATCGGGCAGTTCAATCTACTGTGGTCTGTAGACATCCTTGAGGATGACTCATATTGCATCCAGATTCTGAAGGTTTGTGATATCGTGTCATTTCGTGAAACATCAAGAGCAGTGAAGCAGCTTTGTTCCTTATTTGAAAATTACACAGACGACCGCATCCAACGCTGCAAATTCAAACGTTTAGAAGGGAAGCTTGAAGTTCCTATGATTTGGCCAATCAATCACGATGGTTGCTCTGTAGAGGTGTCAAATTCATTTGCATCACTAAGCCTAGATGATCAATTGGAAGAATATGCTTACAACTGA 3288 0.4078 MRRVNVRRVTGTGGNLTDVVFSWSLDNVLDENFYKRQVGKIPMEFLSKPVYMTSFIPALLEEIRADLLSSMKTVFEDHASDPPVREVQFVEESTRYGPPKNLYNISLKGERVAENDAVTYKPENGDIIALTDTRPNSIDDSKRSERSYLIAFIQGSRKDSDEFQIVSSKPIEFEQNMQEDGKRNTLYAVFLINLTTNICIWNSLTQGLQGGSMAIIEKVLRPNSYAGGRCKICSSGSVSDSVARINSFKLNRSQKAAVLSCLATANCHHQNSVELIKGPPGTGKTNTVGSLLCALLGMKCRTLACAPTNIAVLEVAARVLSLVEESLEYDAYGLGDIVLFGSSEGMNIDDDSDLHDVFLDTRARILVRCFARHSGWKHCLESMINLLEGTKEDRILYMEDRTNKDNNRHKEKKHEKGILEDEKLEICKEREEVQYFEDPKSKKIWKMVGGQTSKGKKNKERQPKVPSPETDKLLYGAKEDKGELTQNKNNRVATGGHHDFLMSEKFVERFDFVGEQLKLFTEALYTHLPTSFISLEVVKDMVRALDLLERLKEVLHECEDVGKCADLLPELYSTREECLQSLKCLCKKITLPNFYTDDKIKKFCLEKACLLFCTASSSVKLKMKGMTPVELLVIDEAAQLKECESTIPLQISGLRHAILVGDEMQLPALVKSKISEKAGFGRSLFERLVLLKHEYHLLNIQYRMHPSISFFPNKEFYENQISDAPNVKDRSYEKQFLQGSMYGPYSFVNVAYGKEEFENHSSRNMVEVAVVSEVVTSLFKESVSKKQKVSVGVISPYKAQVIAIQEKLGKIYNTDEERDFSVKVCTVDGFQGGEEDVIIISTVRGNEKGLVGFLSKRQRANVSLTRARHCLWIFGESETLVASGTVWKRVVEDAKERGCFYNASAEKNLAQAMAISLVEQGQLDDLHDIASLLFGKARWKVFFSDEFWESMVSIFNTEVHKEVVSLLEKLSRGWRLKDRNFYTIHGNLLVQYNVIGQFNLLWSVDILEDDSYCIQILKVCDIVSFRETSRAVKQLCSLFENYTDDRIQRCKFKRLEGKLEVPMIWPINHDGCSVEVSNSFASLSLDDQLEEYAYN* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1093 1095 Gene3D - 216 464 IPR027417 -
Vvi16g1093 1095 FunFam P-loop containing nucleoside triphosphate hydrolase 702 910 - -
Vvi16g1093 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 874 IPR027417 -
Vvi16g1093 1095 Gene3D - 540 702 IPR027417 -
Vvi16g1093 1095 CDD SF1_C_Upf1 704 895 IPR047187 -
Vvi16g1093 1095 PANTHER DNA2/NAM7 HELICASE FAMILY 86 1010 IPR045055 -
Vvi16g1093 1095 MobiDBLite consensus disorder prediction 447 476 - -
Vvi16g1093 1095 Pfam AAA domain 249 424 IPR041677 GO:0004386
Vvi16g1093 1095 Pfam AAA domain 597 673 IPR041677 GO:0004386
Vvi16g1093 1095 Pfam AAA domain 681 877 IPR041679 -
Vvi16g1093 1095 MobiDBLite consensus disorder prediction 453 476 - -
Vvi16g1093 1095 Gene3D - 703 915 IPR027417 -
Vvi16g1093 1095 Pfam Domain of unknown function (DUF6469) 83 205 IPR045529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1093 Vvi-Chr16 19253283 19259022 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1093 - K10706 vvi:100262126 2165.96