Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1090 ATGGCGGTGTCTAGGGTTTCATTGGTGGTGGTGGCGATCATCGCTCTGTTATACGCCGTCGTTTTGCCTTCTGCTCATGCTCAATCTTTGGCGCCTGCTCCTGCGCCCACCAGTGATGGGACGGCAATAGATCAAGGAATTGCATGTGTGTTGATGCTAGTCGCCTTGGTGCTCACATACCTCATCCACCCACTCGATGCTTGA 204 0.5343 MAVSRVSLVVVAIIALLYAVVLPSAHAQSLAPAPAPTSDGTAIDQGIACVLMLVALVLTYLIHPLDA* 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1090 67 PANTHER ARABINOGALACTAN PROTEIN 20 1 63 IPR009424 -
Vvi16g1090 67 Pfam Arabinogalactan peptide 31 63 IPR009424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1090 Vvi-Chr16 19238848 19239593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1090 - - vvi:100263802 110.923