Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1083 ATGGCTACAGCTTACACAGCAGGAGCGTCTTCCATGGTTGCAGCCATATCAAGGCCACGCCTCCCGTCGACGTCGTTTCATCCCCGCTCTTCTCTGCCTAATCTTCCACCTCGCCCCTCTTCTCTTTCTCTCAAGCTTTTCTCAGATTCCAACAGGTTTTCTTCGCTCCAGATCAAAGCCTCTTCAGATGAATCTGGTCCAGTTGATGCAGGAGAGTTATTCTCGGATTTGATGGAAAGGTGGGATGCACTCGAAAACAAATCCACAGTTTTTATCTATGGAGGTGGGGCAATAGTTGCAGTTTGGCTGTCTTCCATCATTGTTAGTGCTATCAATTCGGTCCCTTTGCTTCCAAAAGTCATGGAGTTGGTGGGACTTGGATATACTGGATGGTTTGTCTACCGATACCTTCTCTTTAAGTCAAGCCGAAAGGAACTGGCCACAGATATTGAAGCATTGAAGAAAAAGATTTCAGGAAGTGAATAG 486 0.463 MATAYTAGASSMVAAISRPRLPSTSFHPRSSLPNLPPRPSSLSLKLFSDSNRFSSLQIKASSDESGPVDAGELFSDLMERWDALENKSTVFIYGGGAIVAVWLSSIIVSAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKISGSE* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1083 161 PANTHER - 13 160 IPR033344 GO:0009579
Vvi16g1083 161 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 77 159 IPR025564 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1083 Vvi-Chr16 19198071 19200931 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1083 - - vvi:100246662 288.5