Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1067 ATGACTACGAAACATCTTGTCCGGTCATCTTTTGCAAGAAAAAAGGGAGAAGCATCGCTCCCAGTTGACCTGACATCAACATTTCCCATATCTGAGAACTCAAGCAGTCTTGCAGCTACTATAAGTTTTGTTGATCTTACGGGGAGTAAACGTGCTTCTCAGATATTATCAGAGGGTACAAGATTGAAAAAAGGTTGCCACATAAATCGCAGTTTACTAACCTTGGGAACTATTATTCGCAAACTAAGCAAATTAAGAAATGCGCACATACCATATAGAGGCTCTAAGCTAACACACATTCTACAGAATTCCTTAGGAGGCAATGCTAGAACTACCATCATTTGCACTATGAGCCCTACATACAATTCATCTGAAAAACTAGAGAAGAAGAGGCGTCATTTGAACACTGTGTCATCCCTCATGGCCCGAAACTCCAGTGTTTCTCCTGATAATCGAAGCGATCCAAAACTAGATTGTGTTAAAGAGTTGTCAACAAATGCACATGTCAATGTAGTGATGTCAGATAAGATATTGGTAAAGCATTTGCAAAGAGAATTAGCTAGACTAGAGAGTGAGTTGAAAAGTTTAGGATTAAATCATGTTGCCAATGACTCTACCGCACTACTAGAGAAGAAAGAGCTTCTGATTAAAAAGATGGATAAAGAGACAAAATATTTAACTCAGTAA 687 0.3843 MTTKHLVRSSFARKKGEASLPVDLTSTFPISENSSSLAATISFVDLTGSKRASQILSEGTRLKKGCHINRSLLTLGTIIRKLSKLRNAHIPYRGSKLTHILQNSLGGNARTTIICTMSPTYNSSEKLEKKRRHLNTVSSLMARNSSVSPDNRSDPKLDCVKELSTNAHVNVVMSDKILVKHLQRELARLESELKSLGLNHVANDSTALLEKKELLIKKMDKETKYLTQ* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1067 228 PANTHER CENTROMERE PROTEIN E 34 227 IPR027640 GO:0003777|GO:0007018
Vvi16g1067 228 PRINTS Kinesin heavy chain signature 40 58 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g1067 228 PRINTS Kinesin heavy chain signature 90 111 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g1067 228 ProSiteProfiles Kinesin motor domain profile. 1 140 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g1067 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 196 IPR027417 -
Vvi16g1067 228 Coils Coil 172 199 - -
Vvi16g1067 228 SMART kinesin_4 1 142 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g1067 228 Gene3D Kinesin motor domain 12 194 IPR036961 -
Vvi16g1067 228 Pfam Kinesin motor domain 34 123 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1067 Vvi-Chr16 19047647 19073254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1067 29 196 Miscellaneous Gene Families AT5G06670 35.088 1.13e-22 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1067 K11498 - vvi:100257491 249.595