Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1066 ATGCATGGAAACTTGAGTCAAAGCATGCAACTTTTGGATAAATTTGTGAAAAAGGGATGGGTTCTAAACATCTTCACATACTCATTTTTGCTTGAAGCTGCGAATAATGAGAGAGAGGTTGATAAACCCATTAGGCTCTTGGATGAGATAACTGCTGAAGGTGGGAAGCCAAATTTGGTTAACTACAATGTTATGTTAATTAGGCTTACAGGAAGATATCAACAATTTGGATAG 234 0.3675 MHGNLSQSMQLLDKFVKKGWVLNIFTYSFLLEAANNEREVDKPIRLLDEITAEGGKPNLVNYNVMLIRLTGRYQQFG* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1066 77 Pfam Pentatricopeptide repeat domain 11 66 IPR002885 -
Vvi16g1066 77 Gene3D Tetratricopeptide repeat domain 1 72 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1066 3 66 Glycosyltransferase AT1G05670 29.688 9.28e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1066 - - vvi:100247376 103.99