Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1053 ATGACTTTTGATGAAGAAGACTTCTTCAATCCTGGGTGGGCTTTTAAGGAAATGAGTAATGGGACGACGAGAAAAGTTGCAGACAGGCGATCGACTGGAAGGGGCAATGGAGGAAGAAGAGCTGGAAGAGCATTGAAAACCGGCTTTTGGTGCATTCAAGATGAGGCTTTCATGAGGCCTTCAACGGGGGAAGTGGTGAAGATGTTGGAAGGATCACTTGAAATCAACACACCGCCAATGCCACAGACAGTGCTGTAG 258 0.4767 MTFDEEDFFNPGWAFKEMSNGTTRKVADRRSTGRGNGGRRAGRALKTGFWCIQDEAFMRPSTGEVVKMLEGSLEINTPPMPQTVL* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1053 85 MobiDBLite consensus disorder prediction 20 41 - -
Vvi16g1053 85 PANTHER OS07G0415500 PROTEIN 5 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1053 Vvi-Chr16 18887041 18887384 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1053 11 81 Receptor kinase-like Gene Family AT5G38260 35.616 1.71e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1053 - - vvi:100243904 133.65