Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1045 ATGGAACACAATGAAATTCTTAGTTCGACAAAACAGGATTCTCCTGAAGTTATTCCATCACTCATCAAATTTATAGCATCAAATGAAGTGGCCGGCTTTGATAGTATGGAAGACATTTGTAGCTTGAATAACCAGTACCAAATGAATGGCTTTCAGCCCGTCAGTTTGTCATCTGAAGAAACTGAAGCAGCTGCCATCCTAAGCCAAAATCATGTGTCTCGACCAATCAAATCCCACCTTGCGAGTGCTATTTCTATTAGCATGCCATCTTCTCCCTTGGAAGTCCACTTGCAGAACACTAAAAGAGTTCTGTTCAGTGATCATGGTGAAACAATGTTCAGCAATGGGATTCTGGATTCATCAGCTGCATGTAAAACAGCCAGCACCGAACTTCCAAGACAGGCAAAATTTCATTCTCAGCCAATGCCCACTGGTTCTACATATCCTGAGGCAATTGTGGGTGATAAATTTCCTAACCAGTCAGAGTCACAGGCTAGAAATCCAAGGATTGAGAGGTTGAAAGATAAACGATTTGATTCTTTTAAAACATGGTCTGGGAAACTTGAAAGGCAGTTATCAAATTTACGTGGAAAACCACAGGAAAGCGAACTAGAGAATAACACCACACAGAATTCAGAGATGGAAATTTTACCTGTGGATCGTTACTTTGATGCATTAGAAGGACCGGAGTTGGATACCCTGAAGGCCTCAGAAGAATTGGTACTTCCTGAAGACAAGAAGTGGCCATTCCTTCTCCGATATCCTATCTCATCTTTTGGTATCTGCCTTGGCATGAGCAGCCAAGCCATTATGTGGAAAACTCTGGCAACCTCCCCCTCCATGAATTTCCTCCATGTAAGCTCAAATGTAAACTTCAGTCTCTGGTGCATCTCTGCTGCTCTCATTGCCATTGTCTCTTTCATCTACCTGCTGAAAGTAATTTTCTACTTTGAAGCGGTTCGTCGTGAATACTACCATCCAATTCGTGTCAACTTCTTCTTTGCCCCATGGATAGCTTTCCTGTTTTTAGCTCTTGGTGTTCCACCTTCAGTTGCTGAACACCTGCCTCCAGCTCTCTGGTACATTCTCATGACTCCAGTCTTCTGCTTTGAGCTTAAGATCTATGGACAATGGATGTCAGGAGGGCAACGGAGGCTTTCAAAGGTAGCTAATCCTTCAAATCATCTCTCAATCGTTGGGAATTTTGTGGGAGCATTACTGGGTGCATCAATGGGGCTAAAAGAAGGACCTATATTCTTCTTTGCTATTGGGTTGGCTCACTACATCGTCCTATTTGTGACTCTCTATCAGAGACTTCCAACCAATGCAACACTCCCAAAAGAGCTCCATCCGGTATTCTTTCTGTTTGTTGCAGCACCCAGTGTGGCTTCTATGGCATGGACAAAGATTCAAGGTTCCTTCGACTATGGGTCACGGATTGCTTACTTCATTGCATTATTCCTGTACTTTTCACTGGCAGTTCGAGTCAATTTTTTCCGAGGGTTCAGGTTCTCATTGGCATGGTGGGCTTACACTTTCCCAATGACTGGGGCTGCCATTGCAACCATCAGATATTCAAATGAAGTCACAAACATAGTGACCCGATCTCTCTCAGTCACACTCTCTGCCATTGCCATTCTCACAGTAACAGCTTTGCTGATAACAACTATCCTTCATGCATTTGTGCTCCAAGACCTCTTCCCAAATGACATTGCTATTGCGATTAGTGAGAGAAGACGAAAAACAAGCAAGAAGTGGTATCACTTGAGGACTGGAAGTTCAGATACCAAAGAGATTGAAAATTTCCTAAAATTTGGAAGCTCTGATAACAAGGACATTGAAGCTTCCCTGAAACCTCCAAGCTGCAAACCTGAGGAAGTTTGA 1884 0.431 MEHNEILSSTKQDSPEVIPSLIKFIASNEVAGFDSMEDICSLNNQYQMNGFQPVSLSSEETEAAAILSQNHVSRPIKSHLASAISISMPSSPLEVHLQNTKRVLFSDHGETMFSNGILDSSAACKTASTELPRQAKFHSQPMPTGSTYPEAIVGDKFPNQSESQARNPRIERLKDKRFDSFKTWSGKLERQLSNLRGKPQESELENNTTQNSEMEILPVDRYFDALEGPELDTLKASEELVLPEDKKWPFLLRYPISSFGICLGMSSQAIMWKTLATSPSMNFLHVSSNVNFSLWCISAALIAIVSFIYLLKVIFYFEAVRREYYHPIRVNFFFAPWIAFLFLALGVPPSVAEHLPPALWYILMTPVFCFELKIYGQWMSGGQRRLSKVANPSNHLSIVGNFVGALLGASMGLKEGPIFFFAIGLAHYIVLFVTLYQRLPTNATLPKELHPVFFLFVAAPSVASMAWTKIQGSFDYGSRIAYFIALFLYFSLAVRVNFFRGFRFSLAWWAYTFPMTGAAIATIRYSNEVTNIVTRSLSVTLSAIAILTVTALLITTILHAFVLQDLFPNDIAIAISERRRKTSKKWYHLRTGSSDTKEIENFLKFGSSDNKDIEASLKPPSCKPEEV* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1045 627 PANTHER S-TYPE ANION CHANNEL SLAH3 167 581 IPR030183 GO:0006873|GO:0008308|GO:0016020
Vvi16g1045 627 MobiDBLite consensus disorder prediction 136 169 - -
Vvi16g1045 627 CDD TDT_SLAC1_like 253 556 - -
Vvi16g1045 627 Gene3D - 250 567 IPR038665 -
Vvi16g1045 627 Pfam Voltage-dependent anion channel 255 557 IPR004695 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1045 Vvi-Chr16 18793359 18798293 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1045 - - vvi:100242167 1228.77