Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1040 ATGAGTACCCCATTGGAGAGATACCAAAAACTCGGTCTGAGAGACTCCCTCCCTCGAATCTATCAATATCCGTTCGTCTGCAAAGAGTTGAGCTTCATTCTCAGAGGCGCTTATAATAAACTCCCCAAAAATCTCCAGTCTCTCGTCTTCCAAGATACCCTCGCAGCTTTTCGTCTCCTTCCCCAAATGCAGACACAGAGTGCTGTTTCAGCAGCTAATCTCCTCCTGCAGAGTGCAGAGGCCGTGTTGCCAAAGCAGAAGAGAACTCAGGCAGTTACAGAATTTAAGCATGCAAAGGTTGCTTGTAAAAGGCGCTCTAAAGCTCGACAGGAAGAAGAAGGTTTGGCCCATCTGCCTCAAGATGTTCTTGTGCATATCTTCAGTTTCCTGGATATGCAATCCCTACTTTCTGTTGGGTTAGCCTGCTGGTCATGGAACTCAGCAGCAAGCGATAACTGTTTGTGGCAGTTGCAATATGCTATTTGCTTTGGTAATTCTGAAGATATTTCCAAGATGAAAGGGCGCAGGGATGGTGAACTAGTTGAAGATAAGGAAGAAACTAAGCTAAAAGAGGACATTGCCACTAGAACTGGTGTTGACTGGAGAGATGCCTTCAAAAGAAAATATAAAGGCAAGCGGGCAAAACGATTCACATCTAATAGGGGATATTGTGGAGTTTGCCACACGATAGTTTGGCTCAGTAACATGAAATGTCCGAAAAGACACCCTGGAGTGAAGTCTGAAAATCAGCAGATTAAGCCTGTATCACCTCAGCAGATTGTTGAATATATATTGGATGATTCTTTGTCAATGACATCCTCTTCGGATAGTGATAGTGATTCGGAAGGAGGGTTGCTCTCCAAGCTGTGGACTTATCCAAGGTACATTGGTATTGATTGA 900 0.4422 MSTPLERYQKLGLRDSLPRIYQYPFVCKELSFILRGAYNKLPKNLQSLVFQDTLAAFRLLPQMQTQSAVSAANLLLQSAEAVLPKQKRTQAVTEFKHAKVACKRRSKARQEEEGLAHLPQDVLVHIFSFLDMQSLLSVGLACWSWNSAASDNCLWQLQYAICFGNSEDISKMKGRRDGELVEDKEETKLKEDIATRTGVDWRDAFKRKYKGKRAKRFTSNRGYCGVCHTIVWLSNMKCPKRHPGVKSENQQIKPVSPQQIVEYILDDSLSMTSSSDSDSDSEGGLLSKLWTYPRYIGID* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1040 299 Pfam F-box-like 116 156 IPR001810 GO:0005515
Vvi16g1040 299 ProSiteProfiles F-box domain profile. 112 158 IPR001810 GO:0005515
Vvi16g1040 299 SUPERFAMILY F-box domain 109 209 IPR036047 GO:0005515
Vvi16g1040 299 Gene3D - 100 216 - -
Vvi16g1040 299 SMART fbox_2 118 158 IPR001810 GO:0005515
Vvi16g1040 299 PANTHER OS05G0526300 PROTEIN 1 296 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1040 - - vvi:100257844 580.482