Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1038 ATGGCAGATCATGCGGGCGAGTCCGAATCCGCCATGGAGTCGGTGATGGAAACGATAACCGCGAAGCTTCATGGCTATGACTCGCCCTCGTCGTCAGACTCCGAAGACGGCAAGAAGTCGCTGGTGGAGGCTGTGAAATCGAAGAGTTACAGGCTTTTCGGAAGGGAAAAGCCTCTTCACAAGGTCCTAGGGGGTGGAAAACCTGCTGATGTCTTCCTGTGGAGAAATAAGAAGATTTCAGCCAGTGTGCTCGGCTGCGCCACTGCAATATGGGTTCTCTTTGAAATGCTTGAATACCAATTGCTTCCTCTACTATGCCACATTTTAATGCTCAGTTTGGCATCCCTTTTCCTGTGGTCCAATGCATCCATCGTCATCAAGAAGTCACCTCCAAACATCCCAGAAGTTGGAGTTCCTGAGAAAGCTGTCATGGAGATTACCTCAGCCCTGCTATATGCAATCAACCGAGGTCTAACTTCACTGCACAACATTGCATCCGGGAGACATTTGAAGCAGTTTCTCGCTGTTACTGCTGGGTTGTGGGTTTTGTCAGCTGTGGGGAGATGGTGTAACTTCATCACCTTGTTCTACTTATTGTTTGTTTTGCTACACACGGTGCCTGTCATTTACGAGAAGTATGAGGATGAAGTGGATTCGTCAGCTGAGAAAGTTAAGACCGAAATCAAAAACCAGTACAGAGTCCTTTGCGAGAAGGTTCTCAGAGGACAACCTGAAGACGTGTTGAAGGTCAGGAAGCTGTCTTAG 765 0.481 MADHAGESESAMESVMETITAKLHGYDSPSSSDSEDGKKSLVEAVKSKSYRLFGREKPLHKVLGGGKPADVFLWRNKKISASVLGCATAIWVLFEMLEYQLLPLLCHILMLSLASLFLWSNASIVIKKSPPNIPEVGVPEKAVMEITSALLYAINRGLTSLHNIASGRHLKQFLAVTAGLWVLSAVGRWCNFITLFYLLFVLLHTVPVIYEKYEDEVDSSAEKVKTEIKNQYRVLCEKVLRGQPEDVLKVRKLS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1038 254 Pfam Reticulon 69 224 IPR003388 -
Vvi16g1038 254 ProSiteProfiles Reticulon domain profile. 68 254 IPR003388 -
Vvi16g1038 254 Coils Coil 210 230 - -
Vvi16g1038 254 PANTHER RETICULON 39 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1038 Vvi-Chr16 18741352 18742994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1038 - - vvi:100262972 503.442